Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_028699.1
Length=40740
Score E
Sequences producing significant alignments: (Bits) Value
seq4111 1112 0.0
>seq4111
Length=4130
Score = 1112 bits (1232), Expect = 0.0
Identities = 744/824 (90%), Gaps = 4/824 (0%)
Strand=Plus/Plus
Query 17505 GGAAACCTACAATCTGGCGATCCGCAA-GCGCATCCTCGAAACGCGGGGC-GTGAAAT-C 17561
||||||||||| ||||||||| || ||| |||||||||||||||||| || |||| |
Sbjct 3305 GGAAACCTACATCTTGGCGATCCATAAAGCGTATCCTCGAAACGCGGGGCCGTTAAATTC 3364
Query 17562 CATCCTCTCTTT-CAATACCACAGTGAACACGACGACGCGCCGCGTCCAGTTCTTCGCTG 17620
||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 3365 CATTCTCTCTTTGCAATACGACAGTGAATACGACGACGCGCCGCGTCCAGTTCTTCGCTG 3424
Query 17621 AAATCGACACTATCTACGGAACAACGACAGTAACCAGCGAGGCATAAATGGCCCTCAATT 17680
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3425 AAATCGACACTATATACGGAACAACGACAGTTACCAGCGAGGCATAAATGGCCCTCAATT 3484
Query 17681 TGGACACACTCGGCTTATCGGCAACGGTAACCGCTGAGGGGATCAGTGCGCCTGATTACC 17740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3485 TGGACACACTCGGCTTATCGGCAACGGTAACCGCTGAGGGGATCAGTGCGCCTGATTACC 3544
Query 17741 AGACGATACTCGATACCCTGACGAGCTATTTCCAGCAGATTTATGGTAGTGACGCTTATC 17800
|||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 3545 AGACGATACTTGATACCCTGACGAGCTATTTCCAGCAGATTTATGGCAGCGACGCTTATC 3604
Query 17801 TGGAGCCGGACAGCAAAGACGGCCAGATGGTGGCGCTGGTGGCGCTTGCTATTCACGATG 17860
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3605 TGGAACCGGACAGCAAAGACGGCCAGATGGTGGCGCTGGTGGCGCTGGCTATTCACGATG 3664
Query 17861 CCAATAACACAGCCATTTCCGTCTATAACTGCTTCTCACCTGCTACGGGTTACGGCGCAG 17920
|||||||||| |||||| |||| || |||||||||||||||||||||| |||||||||||
Sbjct 3665 CCAATAACACGGCCATTACCGTTTACAACTGCTTCTCACCTGCTACGGCTTACGGCGCAG 3724
Query 17921 CGCTGACCAGTAACGTAAAAATTAACGGTATCGCGCGCAAAGGTGCAACGAACTCTACCG 17980
|||| ||||||||||| |||||||||||||||||||||||||| || |||||||| ||||
Sbjct 3725 CGCTAACCAGTAACGTGAAAATTAACGGTATCGCGCGCAAAGGGGCGACGAACTCCACCG 3784
Query 17981 TGGATTTACTGCTCACTGGCACCGCAGGAACAACCATTACGAACGGCACCGTGAAAGACA 18040
||||| | |||||||| ||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 3785 TGGATCTGCTGCTCACCGGCACCGCAGGGACAACCATTACGAACGGTACCGTGAAAGACA 3844
Query 18041 CTAATAATGTGATCTGGCGTCTTCCGGCTTCAGTGGTGATTGGTGTTGATGGCACCGTGA 18100
| ||||| ||||||||||| ||||| || || || |||||||||||||| || || ||||
Sbjct 3845 CCAATAACGTGATCTGGCGCCTTCCTGCCTCGGTAGTGATTGGTGTTGACGGTACGGTGA 3904
Query 18101 CGGTAACTGCTATCTGTTCAAACAGCGGAGCGGTTGCGGCGCTGGCCGGGACGATCACCA 18160
||| |||||| | ||| ||||||||||| ||||| || |||||||| ||||| || || |
Sbjct 3905 CGGCAACTGCCACCTGCTCAAACAGCGGCGCGGTCGCAGCGCTGGCGGGGACAATTACTA 3964
Query 18161 CCATCAATACACCGACCCGTGGCTGGACGTCAGTAACCAACCCGGCAGCGGCCGCCGTTG 18220
||||||| || |||||||| |||||||| || ||||||||||||||||||||| |||| |
Sbjct 3965 CCATCAACACGCCGACCCGAGGCTGGACATCGGTAACCAACCCGGCAGCGGCCACCGTAG 4024
Query 18221 GCGCACCTGCAGAAACGGACGCAGAACTGCGCATCAGGCAGGGGCAGAGTGTCGCGATAC 18280
|||| || |||||||| |||||||| ||||||||||||||||||||||| || ||| | |
Sbjct 4025 GCGCTCCGGCAGAAACCGACGCAGAGCTGCGCATCAGGCAGGGGCAGAGCGTTGCGCTGC 4084
Query 18281 CATCCATCACACCATTTGAAGGTGTGGACGGGGCGATCGCTAAT 18324
| || |||||||| |||||||| || || || ||||| ||||||
Sbjct 4085 CCTCTATCACACCGTTTGAAGGCGTCGATGGTGCGATTGCTAAT 4128
Score = 955 bits (1058), Expect = 0.0
Identities = 716/835 (86%), Gaps = 18/835 (2%)
Strand=Plus/Plus
Query 13443 ATTTACGGTGGTGGTGATCCGCACTCCGTGGGGAATCAG--GTAGAACGTCGGCAGCAGT 13500
|||||||||||||||||||||| || | | || |||| || ||||| || |||||||
Sbjct 1 ATTTACGGTGGTGGTGATCCGC-GTCAG-GTGGGTTCAGAAGTTGAACGCCGCCAGCAGT 58
Query 13501 CTGCAAATGCCCAGCTCATGCGCGGCAATCAAACGAAGGTGGGTTAATGGATATTCTCTC 13560
| ||||| || ||| ||||||| |||||||||||||||||||| |||||||| |||||||
Sbjct 59 CGGCAAACGCTCAGGTCATGCGTGGCAATCAAACGAAGGTGGGCTAATGGATTTTCTCTC 118
Query 13561 TACTCTCTTTCATCAGCAGTCCAGGAGAATTGGGGTGCTTATCCCCAGTGTGGTTGTTTC 13620
||||||||||| |||||| || | | ||| ||| || | ||||||| ||||| || ||
Sbjct 119 AACTCTCTTTCAACAGCAGACCCGAAAAATCGGGATGATCGTCCCCAGCGTGGTGGTATC 178
Query 13621 AGAGAAGCACACCGACACGCTAGAGATAACAGAGCACCCTGTCGAGGTCGGTGCCGCCAT 13680
|||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||||
Sbjct 179 TGAGAAGCATACCGACACGCTGGAGATAACAGAGCACCCTGTCGAGGTCGGGGCAGCCAT 238
Query 13681 CGCTGACCATGCCTACAAAAAACCGTCTGAAGTGGTGATGGAGGTCGGTTTCGCTGGTGG 13740
|| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 239 TGCGGACCATGCCTACAAAAAGCCGTCCGAAGTGGTGATGGAGGTCGGTTTCGCTGGTGG 298
Query 13741 CGGATCGTTGCTGGATTTTGCCAGTAACCTGACGGCCACCAGCTTACTGGGCCTGAGTCC 13800
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 299 CGGAGCGTTGCTGGATTTTGCCAGTAATCTGACGGCCACCAGCTTACTGGGCCTGAGTCC 358
Query 13801 TCAGCAGACGTATCAGGAGATACTCGACTTGCAGGAAAGCCGTATTCCCTTCGATGTGGT 13860
|||||||||||||||||||| || ||| | |||| ||||||||||| |||||||||||
Sbjct 359 CCAGCAGACGTATCAGGAGATTCTTGACCTACAGGCGAGCCGTATTCCTTTCGATGTGGT 418
Query 13861 GACCGGCAAACGGCTGTACAGCAACATGCTGATCCGCGCACTGGAGGTGACGACCGACAG 13920
|||||| || |||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct 419 GACCGGTAAGCGGCTGTATAGCAACATGCTGATCCGCGCGCTGGAAGTGACGACCGACAA 478
Query 13921 GACGACCGAAAATGTCTTGTCCGCCGTCCTCACCCTGAGGGAGGTTCTCATCTCGCAGAC 13980
|||||||||||| || || || |||||||||||||||||||||||||| |||||||||||
Sbjct 479 GACGACCGAAAACGTATTATCTGCCGTCCTCACCCTGAGGGAGGTTCTTATCTCGCAGAC 538
Query 13981 GCAGCAGGTAACCGTCGCGGATAAAACCGACATGAAGGACGGGGCCAGCACGTCGCCAGT 14040
||||||| | ||||| |||||||||||| |||||||||||||||||||||||||| | ||
Sbjct 539 GCAGCAGATCACCGTTGCGGATAAAACCAACATGAAGGACGGGGCCAGCACGTCGGCGGT 598
Query 14041 CCTCAATACCGGAACCAAAACAACTAAACCGCCCAACACTTCTTTATTGCAGAG------ 14094
||||||||||| |||||||| || || ||||| || || || | || | ||
Sbjct 599 GCTCAATACCGGCACCAAAACCACAAAGCCGCCAAATACCTCGCTGCTGAAAAGCATCAC 658
Query 14095 TGGT------GCGGCTTTTCTGGGGCTGGGTTAATGACTATTCAGGAAATTCCGCTGACC 14148
||| ||| | || |||||||| || ||||| | ||||| ||||| ||||||||
Sbjct 659 GGGTAACGCGGCGTCATTACTGGGGCTCGGCTAATGTCAATTCATGAAATCCCGCTGACA 718
Query 14149 GCGGATAACCAGCAGTTCAGCATCATCCTGGCGGGTATCACGTGGCGGATTCGCATCATC 14208
|||||||||||||| |||||||||||||||||||| | ||| || |||||| |||||| |
Sbjct 719 GCGGATAACCAGCAATTCAGCATCATCCTGGCGGGGACCACCTGACGGATTAGCATCACC 778
Query 14209 TGGCGTGACCTGTACTGGATCATGGACCTGCAGAACGACAG-GGGGGAGCCGGTA 14262
|| || || ||||||||||| ||||||||||| |||||||| |||||||||||||
Sbjct 779 TGACGCGATCTGTACTGGATTATGGACCTGCA-AACGACAGAGGGGGAGCCGGTA 832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130209395776700
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