Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq2189 104 2e-17 seq2024 91.5 2e-13 >seq2189 Length=7749 Score = 104 bits (114), Expect = 2e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 64857 AAATGGTACACACTACAGGATTCGAACCTGTGACCTAGGGCTTAGAAGGTCCTTGCTCTA 64916 |||||| || | ||||||||||||||||||||||||| ||||||||||| | ||||||| Sbjct 7440 AAATGGCACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTA 7499 Query 64917 TCCAACTGAGCTAAGTGTGCAT 64938 |||| |||||||||| | |||| Sbjct 7500 TCCAGCTGAGCTAAGGGCGCAT 7521 >seq2024 Length=8047 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 64858 AATGGTACACACTACAGGATTCGAACCTGTGACCTAGGGCTTAGAAGGTCCTTGCTCTAT 64917 ||||| || | || ||||||||||||| |||||| ||||||||||| | ||||||||| Sbjct 7745 AATGGCACGCCCTGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTAT 7804 Query 64918 CCAACTGAGCTAAGTGTGCA 64937 |||||||||||||| | ||| Sbjct 7805 CCAACTGAGCTAAGGGCGCA 7824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518081814807000