Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_028764.1 Length=49316 Score E Sequences producing significant alignments: (Bits) Value seq4202 89.7 2e-13 >seq4202 Length=4526 Score = 89.7 bits (98), Expect = 2e-13 Identities = 128/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 39782 TACCAAGTAACTAAAAAACAACTAGCATTTTGGA-TGGGGTACTCAGAAGAAAGTATAAG 39840 || ||| |||||||||||||| |||| ||| | | | || || ||| |||| |||| Sbjct 6 TATCAAATAACTAAAAAACAAATAGC-TTTCGAATTAGGCTATTCAACAGAATCAATAAA 64 Query 39841 AGCATTAATGGATAGATTCGTAAATCACCATAAGTGTATTA-AATATAATCCCGATACTA 39899 ||| | || |||||||| | |||||| || || | || || | || ||| | | |||| Sbjct 65 TGCACTGATAGATAGATTTGAAAATCATCACAAAT-TAGTACATTACAATTCAGTTACTC 123 Query 39900 GAGAAATTGCCATAAAAAACTGGGGCAAATATAACTTAACTAAAGGTGGTAAACC 39954 ||||||| || |||||||| ||||| | || || || | |||| |||||||| Sbjct 124 GAGAAATGGCTATAAAAAATTGGGGTAGGTACAATTTCAACAAAGCAGGTAAACC 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157644798906300