Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_028764.1
Length=49316
Score E
Sequences producing significant alignments: (Bits) Value
seq4202 89.7 2e-13
>seq4202
Length=4526
Score = 89.7 bits (98), Expect = 2e-13
Identities = 128/175 (73%), Gaps = 4/175 (2%)
Strand=Plus/Plus
Query 39782 TACCAAGTAACTAAAAAACAACTAGCATTTTGGA-TGGGGTACTCAGAAGAAAGTATAAG 39840
|| ||| |||||||||||||| |||| ||| | | | || || ||| |||| ||||
Sbjct 6 TATCAAATAACTAAAAAACAAATAGC-TTTCGAATTAGGCTATTCAACAGAATCAATAAA 64
Query 39841 AGCATTAATGGATAGATTCGTAAATCACCATAAGTGTATTA-AATATAATCCCGATACTA 39899
||| | || |||||||| | |||||| || || | || || | || ||| | | ||||
Sbjct 65 TGCACTGATAGATAGATTTGAAAATCATCACAAAT-TAGTACATTACAATTCAGTTACTC 123
Query 39900 GAGAAATTGCCATAAAAAACTGGGGCAAATATAACTTAACTAAAGGTGGTAAACC 39954
||||||| || |||||||| ||||| | || || || | |||| ||||||||
Sbjct 124 GAGAAATGGCTATAAAAAATTGGGGTAGGTACAATTTCAACAAAGCAGGTAAACC 178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157644798906300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |