Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_029000.1 Length=162327 Score E Sequences producing significant alignments: (Bits) Value seq2024 86.0 7e-12 seq2189 84.2 2e-11 >seq2024 Length=8047 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 64250 TGGCAGTCCCTATTGGATTTGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCTCTATCC 64309 ||||| |||| | ||||| ||||| | |||| ||||||||||||||| |||||||||| Sbjct 7747 TGGCACGCCCTGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCC 7806 Query 64310 AACTGAGCTAAG 64321 |||||||||||| Sbjct 7807 AACTGAGCTAAG 7818 >seq2189 Length=7749 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 64244 TTGATTTGGCAGTCCCTATTGGATTTGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCT 64303 |||| ||||| ||||| ||||| ||||| ||||| ||||||||||||||| |||| Sbjct 7437 TTGAAATGGCACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCT 7496 Query 64304 CTATCCAACTGAGCTAAGAGACCATA 64329 ||||||| |||||||||| | |||| Sbjct 7497 CTATCCAGCTGAGCTAAGGGCGCATA 7522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519163091341000