Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_029069.1 Length=165031 Score E Sequences producing significant alignments: (Bits) Value seq4202 89.7 5e-13 >seq4202 Length=4526 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 33895 TATATACGATTACTAAAAAGCAAATGGCTTTTGACCTGGGATATTCACCAGAAACAATAA 33954 ||||| || |||||||| ||||| ||||| || | || |||||| ||||| |||||| Sbjct 4 TATATCAAATAACTAAAAAACAAATAGCTTTCGAATTAGGCTATTCAACAGAATCAATAA 63 Query 33955 ATAGCTTGCTGGACCGTTTTATCACTAATCACAAGCTTATTA-AGTACAACGAAGAGACG 34013 || || | || | ||| | | ||||||| ||| || | ||||| || || Sbjct 64 ATGCACTGATAGATAGATTTGAAAATCATCACAAA-TTAGTACATTACAATTCAGTTACT 122 Query 34014 CGAGAGCTCGCCGTTATTAAATGGGCGAAGTACAACTTAAACAAGGCTGGCAAACCTGTA 34073 ||||| | || | | || |||| | |||||| || ||||| || || ||||||||| Sbjct 123 CGAGAAATGGCTATAAAAAATTGGGGTAGGTACAATTTCAACAAAGCAGGTAAACCTGTA 182 Query 34074 GAAGATTGTGT 34084 ||||||||||| Sbjct 183 GAAGATTGTGT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527813303613000