Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq3061 82.4 7e-11 >seq3061 Length=4438 Score = 82.4 bits (90), Expect = 7e-11 Identities = 97/129 (75%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 49016 TCAATAAATTTATCCGGGATAACAACTCCAATAGAAAGCGTCTTTGCA-CGAACATCCTC 49074 ||||| | |||||| || ||||| || || ||| ||| || | ||| | ||| || || Sbjct 1156 TCAATCATTTTATCGGGTATAACTACGCCGATATTAAGTGT-TGAGCATCTAACGTCATC 1098 Query 49075 ATCCGCAGAAATCTTCTTCGTATCAAGGAAGTCATTGATGTCAGGGTGGAATACGTTTAG 49134 ||||| |||||||||||| |||||||||| ||| || | |||||||||||||| Sbjct 1097 GTCCGCGCTAATCTTCTTCGTTGCAAGGAAGTCGAAGATATCGGCATGGAATACGTTTAG 1038 Query 49135 ATACACACT 49143 ||| || || Sbjct 1037 ATAAACGCT 1029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484261532211000