Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq276 82.4 6e-11 >seq276 Length=376631 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCC 101101 ||||||||||| |||||||| || |||| | ||| | |||||||||||| || || Sbjct 241620 GTTGATTCTTTCTGAATATTATAGTCGGATAAAGTACGGCCATCTTCCAATTGCTTTCCG 241561 Query 101102 GCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 101161 ||| | || | | ||||| ||| || | ||||||||||| |||||| |||| Sbjct 241560 GCAAAAATTAATCGCTGTTGATCTGGTGGGATCCCTTCTTTGTCTTGAATTTTAGCTTTC 241501 Query 101162 ACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTT 101221 |||| | | | |||| || | ||| | || || |||||||| || | ||| Sbjct 241500 ACATTTTCAATAGAGTCTGAAGATTCTACTTCCAAAGTGATGGTTTTGCCAGTAAGGGTT 241441 Query 101222 TTAATAAAAATTTGCATT 101239 || | ||| ||||||||| Sbjct 241440 TTCACAAAGATTTGCATT 241423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409541348671575