Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_030919.1 Length=42418 Score E Sequences producing significant alignments: (Bits) Value seq2959 280 4e-71 >seq2959 Length=4395 Score = 280 bits (310), Expect = 4e-71 Identities = 461/650 (71%), Gaps = 21/650 (3%) Strand=Plus/Minus Query 14826 GCGCGGTGTGTTGATTTTCTCGATGGAAATGAGCGCCATTCAGGTTGTTGAGAGAGGGAT 14885 |||||| ||| |||||||| ||||||||| ||| | |||| |||| ||| | | | Sbjct 1110 GCGCGGCGTGCTGATTTTCAGCATGGAAATGGACGCTAATCAGATTGTGGAGCGCCAGCT 1051 Query 14886 TGCCGGCGCAGGAATGATGTCGGTCAGTGTGCTGCGTAACCCGTCACGTATGGACGATGA 14945 ||| || ||||||| |||| || | ||||| || || ||| |||||||| || Sbjct 1050 TGCAGGAGCAGGAAACTTGTCAGTGTCGGCACTGCGAAATCCAGCACAAATGGACGACGA 991 Query 14946 AGGATGGGGCGAGAGTTGCAAGCGGGATG--AAG-TTGCTGGCAGATCTGGATGTGTGGG 15002 ||| |||| | | ||| | || ||| ||| ||||| | |||| || || ||| Sbjct 990 AGGCTGGG-CAAAAGTCACCGCTGGAATGGGAAGATTGCTTG---ATCTCGACGTATGGA 935 Query 15003 TAGTTGACGC-ATCGCGTTTATCTGTCGAAGAAATCAGGTCCATTTCCGAACGCCACAAG 15061 | || ||||| | | | | | | || || | ||| | |||| ||||||| |||||| Sbjct 934 TTGTGGACGCCAGCAAGATGAAC-GTGGAGCAGATCCGCGCCATCGCCGAACGTCACAAG 876 Query 15062 CAGGAGCATCCTAATCTGTCACTGATTATGGCTGACTATCTCGGGCTAATTGAGAAACCA 15121 | | | || || || || || | | |||||| ||||| || ||||| || ||| Sbjct 875 CGCAACAACCCGGCACTATCGCTCATCCTTGTTGACTACCTCGGCCTGATTGACAAGCCA 816 Query 15122 AAAGCGGAACGTAATGACCTCGCCATAGCACATATCTCCGGTAGCCTGAAAGCG-ATGGC 15180 || || || || || ||||| || || || || |||||||| |||||||| ||| ||||| Sbjct 815 AAGGCAGACCGCAACGACCTGGCGATCGCGCACATCTCCGGCAGCCTGAA-GCGCATGGC 757 Query 15181 GAAAGACCTGAAAACTCCAGTTATCTCATTAAGCCAGCTCTCCCGCGATGTTGAGAAGCG 15240 ||||| || ||||| || ||||| || | || ||||| |||||||||||||| ||||| Sbjct 756 AAAAGATCTCAAAACGCCTGTTATGTCGCTTAGTCAGCTATCCCGCGATGTTGAAAAGCG 697 Query 15241 GCCAAA---CAAGCGC---CCGACAAACGCAGATTTGCGTGATTCAGGAAGCATTGAACA 15294 || || ||||| ||||| ||||| ||| |||| || || ||||||||||| || Sbjct 696 CCCGAAAGGACAGCGCCGACCGACCAACGCCGATCTGCGCGACTCGGGAAGCATTGAGCA 637 Query 15295 GGACGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGACG-AGAA-CAGTAGC 15352 |||||| ||| |||||||||||||| || ||||| || ||||||| |||| | | Sbjct 636 GGACGCCGACAGCATCATCATGCTCTACCGCGAAGCTGTGTATGACGAAGAATCCCCA-- 579 Query 15353 GCCGCGCCATTTGCTGAAATCATCGTGACGAAAAACCGTTTTGGCTCGCTTGGTACGGTT 15412 || ||| || || ||||||||||| || |||||||| || || ||| || || || Sbjct 578 GCTGCGAAGTTGGCAGAAATCATCGTCACCAAAAACCGCTTCGGGCAGCTCGGCACTGTC 519 Query 15413 TACCAGCGGTTCTGCAACGGACACTTTGTTGCATGTGACCAGGACGAAGC 15462 |||||| ||| ||||| || ||| || |||||||| ||||| Sbjct 518 TACCAGGCTTTCAATAACGGGCATTTTCAGCCAACGGACCAGGAAGAAGC 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135577470223000