Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_030919.1
Length=42418
Score E
Sequences producing significant alignments: (Bits) Value
seq2959 280 4e-71
>seq2959
Length=4395
Score = 280 bits (310), Expect = 4e-71
Identities = 461/650 (71%), Gaps = 21/650 (3%)
Strand=Plus/Minus
Query 14826 GCGCGGTGTGTTGATTTTCTCGATGGAAATGAGCGCCATTCAGGTTGTTGAGAGAGGGAT 14885
|||||| ||| |||||||| ||||||||| ||| | |||| |||| ||| | | |
Sbjct 1110 GCGCGGCGTGCTGATTTTCAGCATGGAAATGGACGCTAATCAGATTGTGGAGCGCCAGCT 1051
Query 14886 TGCCGGCGCAGGAATGATGTCGGTCAGTGTGCTGCGTAACCCGTCACGTATGGACGATGA 14945
||| || ||||||| |||| || | ||||| || || ||| |||||||| ||
Sbjct 1050 TGCAGGAGCAGGAAACTTGTCAGTGTCGGCACTGCGAAATCCAGCACAAATGGACGACGA 991
Query 14946 AGGATGGGGCGAGAGTTGCAAGCGGGATG--AAG-TTGCTGGCAGATCTGGATGTGTGGG 15002
||| |||| | | ||| | || ||| ||| ||||| | |||| || || |||
Sbjct 990 AGGCTGGG-CAAAAGTCACCGCTGGAATGGGAAGATTGCTTG---ATCTCGACGTATGGA 935
Query 15003 TAGTTGACGC-ATCGCGTTTATCTGTCGAAGAAATCAGGTCCATTTCCGAACGCCACAAG 15061
| || ||||| | | | | | | || || | ||| | |||| ||||||| ||||||
Sbjct 934 TTGTGGACGCCAGCAAGATGAAC-GTGGAGCAGATCCGCGCCATCGCCGAACGTCACAAG 876
Query 15062 CAGGAGCATCCTAATCTGTCACTGATTATGGCTGACTATCTCGGGCTAATTGAGAAACCA 15121
| | | || || || || || | | |||||| ||||| || ||||| || |||
Sbjct 875 CGCAACAACCCGGCACTATCGCTCATCCTTGTTGACTACCTCGGCCTGATTGACAAGCCA 816
Query 15122 AAAGCGGAACGTAATGACCTCGCCATAGCACATATCTCCGGTAGCCTGAAAGCG-ATGGC 15180
|| || || || || ||||| || || || || |||||||| |||||||| ||| |||||
Sbjct 815 AAGGCAGACCGCAACGACCTGGCGATCGCGCACATCTCCGGCAGCCTGAA-GCGCATGGC 757
Query 15181 GAAAGACCTGAAAACTCCAGTTATCTCATTAAGCCAGCTCTCCCGCGATGTTGAGAAGCG 15240
||||| || ||||| || ||||| || | || ||||| |||||||||||||| |||||
Sbjct 756 AAAAGATCTCAAAACGCCTGTTATGTCGCTTAGTCAGCTATCCCGCGATGTTGAAAAGCG 697
Query 15241 GCCAAA---CAAGCGC---CCGACAAACGCAGATTTGCGTGATTCAGGAAGCATTGAACA 15294
|| || ||||| ||||| ||||| ||| |||| || || ||||||||||| ||
Sbjct 696 CCCGAAAGGACAGCGCCGACCGACCAACGCCGATCTGCGCGACTCGGGAAGCATTGAGCA 637
Query 15295 GGACGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGACG-AGAA-CAGTAGC 15352
|||||| ||| |||||||||||||| || ||||| || ||||||| |||| | |
Sbjct 636 GGACGCCGACAGCATCATCATGCTCTACCGCGAAGCTGTGTATGACGAAGAATCCCCA-- 579
Query 15353 GCCGCGCCATTTGCTGAAATCATCGTGACGAAAAACCGTTTTGGCTCGCTTGGTACGGTT 15412
|| ||| || || ||||||||||| || |||||||| || || ||| || || ||
Sbjct 578 GCTGCGAAGTTGGCAGAAATCATCGTCACCAAAAACCGCTTCGGGCAGCTCGGCACTGTC 519
Query 15413 TACCAGCGGTTCTGCAACGGACACTTTGTTGCATGTGACCAGGACGAAGC 15462
|||||| ||| ||||| || ||| || |||||||| |||||
Sbjct 518 TACCAGGCTTTCAATAACGGGCATTTTCAGCCAACGGACCAGGAAGAAGC 469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135577470223000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |