Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_031008.1
Length=17861
Score E
Sequences producing significant alignments: (Bits) Value
seq2572 904 0.0
seq2620 820 0.0
seq2740 109 6e-20
>seq2572
Length=8270
Score = 904 bits (1002), Expect = 0.0
Identities = 1519/2159 (70%), Gaps = 65/2159 (3%)
Strand=Plus/Minus
Query 14394 CAAACGCTTCAACTGTTTGTCTGTTGATTTCTCTATCTAAAAAGTGTATTGTGAATGATT 14453
|||| | ||| || |||||||| | || ||||||||||| || || | |||||||
Sbjct 2141 CAAAGGATTCGACGGTTTGTCTACTAATCTCTCTATCTAAGAAACGTGTAACAAATGATT 2082
Query 14454 TTTTAAAAAGTAA--GTCAGATAAAT-CATCTTTAAGTTTAAAACCTTTAAATACTTTTT 14510
||||||| ||| |||| ||| | | ||| ||| | ||| |||||||| | |||
Sbjct 2081 GTTTAAAA--TAACGGTCA-ATATGTTCGTCTGTAAAGTGAAATCCTTTAAAAAAGGTTT 2025
Query 14511 CGTTAACGATAGCTAAAACATCTTTATCAAACTTCAACATTTTTTGCATAAATTGAAATT 14570
||| ||||| | |||||| | ||||| || || |||||| || |||||| | |
Sbjct 2024 CGTCTACGATTTTTTTAACATCATCGTCAAAACGCATCACTTTTTGAATGAATTGATAAT 1965
Query 14571 CATCATCATAAAACGttaatttatcattatttacaaattcattaaaaccttttttaatta 14630
|| | || || ||||||| | ||||| |||||||||||||| |||||| || ||
Sbjct 1964 CAAAGTTATCAATGGTTAATTGTCCGTTATTAACAAATTCATTAAATCCTTTTCTATCTA 1905
Query 14631 attctgatttaataaaatCAAATAAAGTCATTGTATATCTAGCCA-TTGTATTCACTACT 14689
|||| | ||| | |||||||| || ||||||||||||||| ||||| || |
Sbjct 1904 ATTCACTCTCAATGATTTCAAATAAGGTTGTTGTATATCTAGCCACTTGTACCACCTCCG 1845
Query 14690 T--TCATCATTAGACAATGAATCTATCATTGTAATTTCTGAAGTTACTTCATCGTCGTAA 14747
| | || ||| || || | | || | | || ||| ||| ||||||| || |||
Sbjct 1844 TAGTTGTCGGTAGCCA-TGTTTTGAATATCG--ACTTGTGATGTTGCTTCATCATCATAA 1788
Query 14748 TACGGTT-TAATATCTAAACCATAACGTTTTGATAAGAATGTAATCGGTTCACGACCTTT 14806
|| || | |||| ||||| || |||||| ||| | | || |||||||||| |
Sbjct 1787 TAAGGGTGTAAT-TCTAACCCGAAACGTTGGTTTAACATTTCTATACTTTCACGACCTCT 1729
Query 14807 TAAATAAATATTACTATTTGATGTGGTAAAACCTCGGTTGCTTTTTGCCTCTTCGTCCGA 14866
||||||||| || || || || ||||| ||||| |||||||| ||| ||
Sbjct 1728 TAAATAAATGTTTGAGTTAGACGTTGTAAATGAACGGTTACTTTTTGCTTCTGTATCACT 1669
Query 14867 AACACCGCTTTCCTTATCCACTGCTAGTGAATTAATACCTAAATAGTTACTTAATTCACT 14926
||||||||||| ||||| || |||| || |||| |||||| ||||| || ||||||
Sbjct 1668 CACACCGCTTTCTTTATCAACAGCTAAAGAGTTAACACCTAAGAAGTTAGATAGTTCACT 1609
Query 14927 AATTTTATTTTGGTATTCTCTTTTCATCTCAGTTAGTGCTGGAATCACACTATTACTGGT 14986
||||| ||||| ||||||| |||||| ||| ||||| | || || ||| |
Sbjct 1608 TATTTTGTTTTGATATTCTCGTTTCATTTCAACGAGTGCATTGTTAACGTAATCACTTGC 1549
Query 14987 TAAATCTATGATATCATCATCGGCGTTAAACATAGGTGACAT--TTTAACAAATGGTGCA 15044
||| ||||| || || || || || | ||| || || | ||||| || ||||
Sbjct 1548 TAAGTCTATAATGTCCTCTTCAGCATCAAA--TAATCCACTTACTTTAATGAAAGGTGAG 1491
Query 15045 CCGTTGTAT-ATTTCCGATACAAGTTGATTAACTGACTCATCATTAATGTCTGATTTAAA 15103
|| || | | || | | | |||||||| || ||||| |||| || ||||| ||
Sbjct 1490 CCATTAAAACAATTGAGTGATGAATTGATTAATTGTTTCATCGTTAACTTCCGATTTGAA 1431
Query 15104 TATTTTGCTAAATTTTGCTTGCATAATTAATGAAAATCGAGATAAAACAACCTCAGATAA 15163
|||||| |||||| | ||||||||| | |||||| ||| ||||| | || | |||
Sbjct 1430 TATTTTAGCAAATTTGGATTGCATAATAAGTGAAAAACGACTTAAAATGATTTCTGCTAA 1371
Query 15164 TTCATCAGTATAATGTTCTATAATTTCTATA-TCACTATTATATTGA-ATTGGCTTATTT 15221
||||||| ||| ||| |||||| | ||| ||| |||| || || | ||| ||||||
Sbjct 1370 TTCATCACAATAGTGTGAAATAATTGC-ATAGTCATTATT-TAGTGTTACTGGTTTATTT 1313
Query 15222 TGCATGACAACAAAGTTGCCACTCATACAGTTATCATA-TATTTTATGAATCTGTAAGCA 15280
||| |||| ||| | || |||| || ||||| |||| ||| ||| ||||
Sbjct 1312 CTCATAACAATAAAATCACCTGATTTACAATTGTCATAATATTGTATT--TCTA-AAGCG 1256
Query 15281 TTCATCTGGTATTAAATAGTCTGGGACAATGAAATAAATATCTTCTTTTGTTAATCGTTT 15340
| ||| || ||| || | || | | | ||| || |||| | |||||||
Sbjct 1255 TA-ATCAGGGCGTAAGTATTTAGGAATAGTAAAACGTATGTCTTTCTCGTTTAATCGGCG 1197
Query 15341 TTGAAATTGGAAGTTAAAGTTTGATGAAAAATTTGGTGCT-TGATTAAAGTAAGTATTAT 15399
|| ||| ||||||||||| | ||||| | || | ||| | | | |||| |
Sbjct 1196 TTCAAAAGCAAAGTTAAAGTTATTT-AAAAAGTCACCACTATTTTTATAATGATTATTTT 1138
Query 15400 TTACGTAACCAAGAATCATAATTTGTTCATTTCTTGCTTTGCCAACCACTACATTGATGT 15459
|| ||||| || ||||||||||| |||||||| || || ||||| ||||| | |||
Sbjct 1137 CTATATAACCTAGTATCATAATTTGGTCATTTCTAGCCTTACCAACAACTACCT-GATAA 1079
Query 15460 T-TTGTCTTAATGCTGATTCTAATTGAATAAAATCTATACCAACCGTATCACGATTGGTA 15518
||| | |||||| | ||||||||| | |||||||||| || || ||| |||
Sbjct 1078 CCTTGACGTAATGCAGTTTCTAATTGTAAAAAATCTATAGACACGCTACGTTTATTTGTA 1019
Query 15519 TAGTTGATGAGTAGTGGTAAAAATTCCAAATAACGATTAAACATAAGACGTTTAAATCTG 15578
||||| || ||||| |||| ||||||||||||||||||||| ||||| | |||||
Sbjct 1018 TAGTTAATCAGTAGGGGTAGAAATTCCAAATAACGATTAAAAATAAGCCTACGAAATCGA 959
Query 15579 TTGCGATGTTCAACAACTCTTTTGTTGATTTCTTTTGATAATTCAACCTGTACGCC---- 15634
|| | |||||| | ||| | | | || || | ||||| || | |||||
Sbjct 958 TTTCTATGTTCGATAACACGCAGGCTTATGTCCTCAGATAACTCTGTTTCAACGCCAACA 899
Query 15635 --TT---TATT---ATGT------TTAGTCAT-TTATAGCACCTCTA---TTATTCT--- 15673
|| |||| |||| || ||||| ||| || ||| || |||||||
Sbjct 898 TGTTCACTATTTGAATGTGATAGATTTGTCATGTTAACGCTCCTTTAAAGTTATTCTTCT 839
Query 15674 --GTTCTT-GGTGTTACATCTTGGTC---AGTAATTAAAATTTTATTAAAGAATGGGCTA 15727
|| || ||| | | || | || ||| ||||||||||| || |||||||| |
Sbjct 838 GGGTCCTCAGGTTGTTCCTCAGGCTCTGAAGTGATTAAAATTTTGTTGAAGAATGGTGAA 779
Query 15728 ATGGCTTTAAATGAATAGTAATGAATCCAGTGTGTGACTTCATCAAATTCACCATTATAG 15787
| | ||| || || || || ||||| ||||| ||||||||||||||||| ||||||
Sbjct 778 ACAGATTTGAAGCTGTAATAGTGTATCCAATGTGTAACTTCATCAAATTCACCGTTATAG 719
Query 15788 AATGGTTGTTTTAACATACCTTTTGTGTAACGTTTATATTTAATTGAATTAATATCCAAA 15847
||||||| ||| | |||||| ||||| | |||||| ||||| | | |||||||| |||
Sbjct 718 AATGGTTTTTTAAGCATACCGTTTGTATTACGTTTGTATTTCAAAGCGTTAATATCGAAA 659
Query 15848 ATAAACGCGTATAAATCTGATTTTGGTTTAATTTCTTCAACATTATCTTTAAACTCTGAT 15907
|| || ||| ||| || | ||||||| ||| |||||| | ||| || | |
Sbjct 658 ATGAAAGCGAATAGGTCACTATCAGGTTTAACCTCTGTTACATTACCAACAAATTCAGTT 599
Query 15908 AGTTTTGACACATCATAAGTGAATACTGAACCAACTGGAATTGTATCACCTTTATGAGTT 15967
||| ||| | ||| |||| || || ||| | || || ||||||| | |||| |
Sbjct 598 TGTTGTGAAATGTCAAAAGTAAAAGTTGTACCCTCAGGGATAATATCACCAATTTGAGCT 539
Query 15968 TGATAATCACCGTAAGCACGTAAGAAAGCTACTGATTCATCACTTGATACGACAATATCT 16027
|||||||||||| || |||||||| | | | || |||| | || | |||
Sbjct 538 TGATAATCACCGAAACCACGTAAGTAGGTGATTGTGTCATTTTCTTCTAATGTTACATCA 479
Query 16028 TTAGTGACTTTAAAAACACCACCTAGGTCGTCAAAACTGATAACGTGGTCTGTAAAGTCA 16087
| ||| ||| | ||||| |||| ||||||||| || || || |||||||||||||||
Sbjct 478 TCAGTTGTTTTGTACACACCGCCTAAGTCGTCAAAGCTAATTACATGGTCTGTAAAGTCA 419
Query 16088 ATCCCTGCTACTTGGAATGTGTTCGCAATCTTTGTATCTAA-AAGATAAGATTTTAAGCT 16146
|| |||| | ||||||||||||| ||||| ||||||||||| |||| | ||||| | ||
Sbjct 418 ATGCCTGATGCTTGGAATGTGTTAGCAATTTTTGTATCTAATAAGA-ATGATTTAATACT 360
Query 16147 ATCAGTCGTTAAAATAACAATATCTTTTAATTTTGAAACTGTTGTATATTGTCCGATAGC 16206
||| || ||||||||| ||||||| ||||| ||||||||||| || | || || |
Sbjct 359 ATCTGTTGTTAAAATAGCAATATCAGACAATTTAGAAACTGTTGTGTAACGACCAATTGA 300
Query 16207 ACCACCTGAAGCACGATGAACTTCATTATATTTAGCACTGTTGTTTTGTAAGTTAAGAAT 16266
|||||||||||| || | ||||||| ||||| ||||||| ||||| | ||| || |
Sbjct 299 CCCACCTGAAGCAGTATTAGCTTCATTGTATTTGTCACTGTTATTTTGCATGTTTAGTAC 240
Query 16267 AGCTTCAAAAACTTTACTTGCTAAATCTTCTTTTGATGTTGCTTTACGTACATTTGATTC 16326
||||||||| |||||||||||||||||||||| |||||| || | ||| | |||||| ||
Sbjct 239 AGCTTCAAATACTTTACTTGCTAAATCTTCTTGTGATGTAGCGTAACGAATATTTGAGTC 180
Query 16327 AGATAATTGATTCAATGAGTAATCAACTAACATTGCACGCATTTCTTTTTCTTCTAATAC 16386
||||||||| || | || || ||||| | ||| ||||| ||||||||||||||| |||
Sbjct 179 AGATAATTGGTTAATTGCATAGTCAACAACCATGGCACGGATTTCTTTTTCTTCTTCTAC 120
Query 16387 GTTAATATCAGAAATTTTCTTTTTATAGACACCTAATGCATAATTAGTAGCGTCTGCTAA 16446
||||||||||||||| || || || | || ||| ||||| || |||||||| ||||
Sbjct 119 GTTAATATCAGAAATCTTTTTCTTCAATACTGCTAGGGCATAGTTTGTAGCGTCACCTAA 60
Query 16447 TGTTTGGAAATTGAAACGTGTGTCATTGTTATTTAATGTAAATTTTTGTTTCTTCACAA 16505
|| ||| || ||||||| || || ||||||||||||||||||||||| || ||||
Sbjct 59 GTCTTTGAAGTTAAAACGTGCATCGTTATTATTTAATGTAAATTTTTGTTTTTTAACAA 1
Score = 632 bits (700), Expect = 2e-177
Identities = 1044/1484 (70%), Gaps = 33/1484 (2%)
Strand=Plus/Minus
Query 8156 GGTACACTAATTTTCATTGTTAAACCGTTAATACTGTTTGCAATTTGGAACGCGTTGCCC 8215
|||| || |||||||||||||||||||||||||| || ||||||||||| || || |||
Sbjct 8188 GGTATACCGATTTTCATTGTTAAACCGTTAATACTATTCGCAATTTGGAAAGCATTACCC 8129
Query 8216 ATTTCCGACTCT--GTCACTGACGGTGGTTGTAATGCTAAGTCTTTATATTCTGCCTGTT 8273
|||| |||| || ||||||||||||||| |||| ||||||||||||||| ||||
Sbjct 8128 ATTT--GACTTGAAGTTGTTGACGGTGGTTGTAAAGCTAGGTCTTTATATTCTGCTTGTT 8071
Query 8274 GTTGTTTGTAGAAATTATATTCTTCATTAAACTTACCAAATAAAGCTGTCGGACTTAAAT 8333
| | || || | | ||||| |||||||| |||| |||||| |||||| || | ||
Sbjct 8070 GGTTTTGATAATATGTGTATTCATCATTAAATTTACTAAATAATTGTGTCGGGCTGATAT 8011
Query 8334 TACTTGCTACACTCACAGCGTCATAAAAGCGTGATTTCGGGTCGCTACCATTTAATACAT 8393
| ||| | ||| | | ||||| || ||||| |||| ||| | | ||
Sbjct 8010 TGGATGCAATACTTGCCACATCATAGAATTTAGATTTAATGTCGTCACCTGTAGCAATAT 7951
Query 8394 TATCAATACGATTTGTAATTAATTGACTTTCCGCATTCTTTTGTCTATTTGCTTGTTGTG 8453
| | ||||||||| |||||||||||||| ||||| || | || ||||||||||
Sbjct 7950 TTTGCGCACGATTTGTTATTAATTGACTTTCTGCATTTTTCACACGGTTAGCTTGTTGTG 7891
Query 8454 ATTGTCCTAAGATACCATTATTAATTAATATTGGTACTTGTGCAAAACTATTAAATGTTA 8513
|||||||||| |||||||||| |||||| | |||||||| ||||| |||| |||||| |
Sbjct 7890 ATTGTCCTAATATACCATTATCAATTAACACTGGTACTTCAGCAAAGCTATCAAATGTAA 7831
Query 8514 TATTTGTATTTAAGAATGAACCTGTATCAATCAATATTTCTTTATTTTTAGCAAGTATCG 8573
| || ||||||||||| ||||| || |||||||| || ||| | | || |
Sbjct 7830 TTGCAGTGTTTAAGAATGACCCTGTGTCTATCAATATCTCACCATTGGTTGATTTAATGG 7771
Query 8574 GTCTATCGTTTTCAGCGCTGTTATAGTCTACTGGATAAACTCGAACTTCATTATGATAAC 8633
|| || |||| | |||||||||| || ||||||| || ||||||||||||| |||
Sbjct 7770 GTTGTTCTGCTTCACCTTTGTTATAGTCAACGGGATAAATTCTAACTTCATTATGAAAAC 7711
Query 8634 CAATGATTGACTTTGTACGTAACTTAACACCTGTTTTTTGCGAAATCTTACCAGCGTCCA 8693
| || ||||| || || | ||||| |||||||||| | | ||||| || ||||| |
Sbjct 7710 CGATAATTGATTTCGTTCTAAACTTCACACCTGTTTCGGGTGTTATCTTCCCTGCGTCTA 7651
Query 8694 GTAACATTGTATTTCCATTCCAATCGTAAAATTCAATTGTCATGTACTCATTACGTATCA 8753
|||||| | | || ||||| |||| ||| ||||| | || |||||||| | |
Sbjct 7650 ATAACATAGCGTCACCGTTCCATGAATAAACTTCTATTGTAAAATATTCATTACGGACTA 7591
Query 8754 TATGTTTAAACTCGTCTTTTTTAGACAACATCATTTCTTGAAGCTTTG-TGAAACTTAAT 8812
||| | || || || || | | | || || || | | ||||| |
Sbjct 7590 AATGACGTAGTTCAGGTTGATT-GATACCTGCTAAATTTAAAAATTCGTTAAAACTCATA 7532
Query 8813 GATAAATCGTTTAAACTCCATTCTTTTGATTTTCCACCTTGTTTTAACGTCTTTAATCCA 8872
||||| || |||| ||| || ||| |||||| || || |||||
Sbjct 7531 TTTAAATTAGGTAGTGACCATGTTTTAGAACGGCCATTACTTTTTAATGTGTTCAATCCT 7472
Query 8873 GTAATTTTTTCACTTGTCTTAACGTCCTCTAAATCTTTTGTATTAATAAAGTCTTTAGGT 8932
|||| | |||| || || || ||||||| | ||| |||||| | || ||||
Sbjct 7471 TTAATATCTTCATCGGTTTTGACACTTACTAAATCACTACTATCAATAAACTTTTCAGGT 7412
Query 8933 AACATTTGAACCTTTTGAAAGTTTTGTGTAATCCATGGATAAGCACTCATTTTATCCATA 8992
| |||||| | ||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct 7411 ATCATTTGTATTTTTTGGAAGTTTTGAGTAATCCATGGGTATTTGCTCATTTTATCCATA 7352
Query 8993 AAATTAATAAAGTCACCATATTCCATAACGTATAAGTTGACTGGTGATGTGATATTGTCA 9052
||||||| ||| | || | ||| | |||||| || ||||| || |||| ||||
Sbjct 7351 AAATTAACAAAATTTGAATGTGACATGATGTATAAATTAACTGGACTCGTCATATAGTCA 7292
Query 9053 TATATCGTACCTTTAGACGTATCTAAGTTTGGCTCtttttttGTACCAAATTTCTTTGAT 9112
|| | ||||| || ||||||| || ||||||||||| |||| ||||| || |||
Sbjct 7291 TAAGTTAATCCTTTTGAACTATCTAAATTAGGCTCTTTTTTACTACCGAATTTTTTAGAT 7232
Query 9113 AAATCAGCGCTTGACTGGA--ATAACACTAAAT-TTTCCAAATACTGTTGCATTTGGTTA 9169
|| ||||| ||||| || | |||||| || | || |||||| |||| | | |||
Sbjct 7231 AAGTCAGCACTTGATTGAAACATAACA-TAGTTGTTACCAAAT--TGTTCTAAGTAGTTT 7175
Query 9170 TACACATAGTTTTTATTCGATACTTTTAACACATCATCATTGTTACGTAACATTGGTAAC 9229
||||| |||||| | |||| || ||||||||||| |||||||| ||||||
Sbjct 7174 CTTGAATAGTATTTATTTGTCGCTTTCAATACATCATCATTATTACGTAAATAAGGTAAC 7115
Query 9230 ATATAGTTATACGTGCG-TTTTGATAAGTGTTGACGTTCAATATTAACG-TTTGAGAGTT 9287
|| || | ||| || | ||||| ||| ||||||||||| | | || ||||| |||
Sbjct 7114 ATGTATTCATA-TTGAGATTTTGGTAAATGTTGACGTTCCACACGTGCGTTTTGAATGTT 7056
Query 9288 GCTCTAATACATTACCTTGCGTGTACGTCATAATAGTATCAATCACAAAATATATTTTAA 9347
||| ||||||||||| || || ||||| || || ||||| || ||| |||| ||
Sbjct 7055 -AGATAAAACATTACCTTGTGTATAAGTCATGATTGTGTCAATAACCAAAGTCATTTGAA 6997
Query 9348 CCACTACATCATTCACGTATTCTATTTGATTCACAAAAGCGTAATAGCGTCTGTCCTCAA 9407
|| ||| || | ||||| || ||| |||||||||||||| ||||| | |||||
Sbjct 6996 TTACATTATCGTTAATATATTCAATCGCATTAACAAAAGCGTAATAACGTCTATTCTCAA 6937
Query 9408 AATCTGATAAAAACGTCATGTAGTTAATCCCTTGTGCGTCATGCCACTGCATAT---CAA 9464
| ||||| ||||| |||||||| ||||| || ||| ||| | ||| | |
Sbjct 6936 ACCCTGATTTGAACGTACAATAGTTAATACCTTGAGCTTCACTCCAATTCATTTGTGGTA 6877
Query 9465 CATTGATTTCCAT---TCTATCACGTATAAAATTATACGG--TTGTTTGGAATAGTCTAA 9519
| || | | || | || |||||||||||| | || || ||| | | ||||
Sbjct 6876 CTTTAA---CAATGGAGCGGTCGCGTATAAAATTAAATGGGATTTTTTCGTA---ACTAA 6823
Query 9520 -TGATTTAAAATGACGACCTTTTAAAAAATAATCATCGCGTTCTTTATTACTATTAAAAT 9578
|| ||||||||| | ||| ||| |||| |||||||| |||| |||||| ||||||
Sbjct 6822 TTGCTTTAAAATGTCCACCATTT-AAAAGTAATCATCACGTTGCGCATTACTGCTAAAAT 6764
Query 9579 GAATTGTATTTTGATAGTCTG-TAAACGGTGTGTTATAGAAAAA 9621
| || || |||||||| |||| |||| ||||||| |||||||||
Sbjct 6763 GTATCGTGTTTTGATAATCTGTTAAAAGGTGTGTCATAGAAAAA 6720
>seq2620
Length=5891
Score = 820 bits (908), Expect = 0.0
Identities = 1662/2450 (68%), Gaps = 98/2450 (4%)
Strand=Plus/Minus
Query 2336 TTTAATACTGTAAACGACATAATAAACTATTACAAGGAG--CAAAAACATGGTAAAACAA 2393
|||||| | |||| || || ||||||||||| |||| || |||||||
Sbjct 5520 TTTAATTCAATAAATGATATTATAAACTATTAT--GGAGGTCATAAACATG--------- 5472
Query 2394 AACCGTTTAGACATGGTAAGAGATTATCAAAATGCTGTCAATCATGTCAGaaaaaaa-aT 2452
||| | ||||| || | | | |||||||| | | | || || || |||| || ||
Sbjct 5471 AACAGACTAGACGAAGTCAAACAATATCAAAACG-TATTAAACAAGTTTCAAAAGAAGAT 5413
Query 2453 ACCAGATAAGTATAATCAAATAGAATTAGTTGATGAACTCATGAATGATGATATAGACTA 2512
||| | ||||| |||||||||||| | | | | ||||| ||||| | ||||| || |
Sbjct 5412 ACCCAAAAAGTACAATCAAATAGAACTTGCTAACGAACTTATGAACAAAGATATTGATTT 5353
Query 2513 TTATATATCTATTTCAAATCGTTCTGACGGAAAATCGTTCAACTATGTTTCATTTTTTAT 2572
|| ||||||||||| || ||||| ||||| ||| | || ||||| |||||||||||||
Sbjct 5352 TTTAATATCTATTTCCAACCGTTCAGACGGTAAAACATTTAACTACATTTCATTTTTTAT 5293
Query 2573 TTATTTAGCTATTAAACTTGATATAAAATTTACTTTATTATCACGTCATTATACATTACG 2632
| || |||| || | | |||||||||| || | ||||||| ||||| ||||
Sbjct 5292 GAAACTATCTATCGAATTAGGTATAAAATTTGTATTGATTGCACGTCACTATACCCTACG 5233
Query 2633 TGACGCTTACCGTGATTTTATTGAGGAAATT---ATAGATAAAAACCCACTATTCAAATC 2689
| |||| |||||||| | || | |||| || || | | ||| | | |
Sbjct 5232 TAACGCCTACCGTGAACTGATAAATAAAATAGCCATGGAGCATGATG-ACTTTAAAGA-- 5176
Query 2690 TAAGCGTGTCACTTTCAGAAGCGCT-AGA-GACTATTTAGCTATTATCTATCAAGATAAA 2747
|| | | | ||| | |||| ||| |||||| | | || ||| | ||||
Sbjct 5175 -AAAAGACTTA-TTTATGCAGCGTACAGATGACTATATTAATGTTGGTTAT---GGTAAA 5121
Query 2748 GAAAT--TG-GCGTGATTACAGATTTGAATAGTGCCACTGATTTAAAATATCATTCTAAC 2804
|||| || | | |||||||| || || | ||| ||||||||||||||||| ||||||
Sbjct 5120 GAAAGCATGTGTATTATTACAGACTTAAACAATGCGACTGATTTAAAATATCACTCTAAC 5061
Query 2805 TTTTTAAAACACTATCCTATTATTATATATGATGAATTCTTAGCACTTGAAGATGACTAT 2864
||||||||| | ||||| || ||| |||||||||||||| ||||| | ||| ||| ||
Sbjct 5060 TTTTTAAAAGATTATCCAATCATTGTATATGATGAATTCCTAGCATTAGAAAGTGATTAC 5001
Query 2865 TTAATTGATGAGTGGGATAAGTTGAAAACAATTTATGAATCAATCGACCGTAACCATGGT 2924
||| ||||| ||||| || | ||||| || ||||| || || ||||||||||| ||
Sbjct 5000 TTACCAGATGAATGGGACAAACTTAAAACCATATATGAGTCTATAGACCGTAACCACGGG 4941
Query 2925 AATGTTGATTATATTGGATTTCCTAAAATGTTTTTACTAGGTAATGCGGTCAACTTTTCA 2984
||| | ||| | | | | |||||||| | || |||||||||| || ||||||||
Sbjct 4940 AATATACCCTATTTGGAAATACCTAAAATAGTATTGTTAGGTAATGCAGTTAACTTTTCT 4881
Query 2985 AGCCCTATATTATCCAATTTAAATATTTATAATTTATTACAAAAACATAAAATGAATACA 3044
|| || || | | || ||||| || | ||| | | | ||||| ||||| || |
Sbjct 4880 AGTCCCCTACTTGCGAACTTAAACATATTCAATAAACTTGAGAAACACAAAATCAACTCT 4821
Query 3045 TCAAGACTTTACAAAAACAtttttttAGAAATGCGTCGAAACGATTATGTCAATGAAAAG 3104
| | || || | || | |||||| | || || || || ||||||||
Sbjct 4820 ATGCGTCAGTATGGTAATGTATTACTTGAAATGAGACGTAATGACAATTCAAATGAAAAA 4761
Query 3105 CGTAATACACGTGCATTTAATTCAAATGATGACGCTATGACAACTGGCGAATTTGAATTT 3164
|||||||| | || || | | |||| || |||||||| || |||||||| |||
Sbjct 4760 CGTAATACTAGGGCTTTCGACAGTGACAATGATGCAATGACAACCGGTGAATTTGATTTT 4701
Query 3165 AACGAATATAATTTGGCAGATGATAATTTAAGAAATCATATCAACCAAAACGGTGATTTT 3224
||| | || ||||| || ||||| ||| | |||||||| | |||||||||||||
Sbjct 4700 AACAATTACAATTTAGCCGATGACGGATTACGCAATCATATTAGTAAAAACGGTGATTTC 4641
Query 3225 TTCTATATTAAAACTGATGATAAATATATAAAAATTATGTATAATGTTGATACATTTAAT 3284
||||| || ||||| || ||| |||||| ||| | |||||||| || | | ||
Sbjct 4640 TTCTACATCAAAACCGAAGATGCATATATTAAAGTGATGTATAACGTGAACGACTATACA 4581
Query 3285 GCTAACATCATTGTAATACCTTATACAAAACAATATGAGTTTTGCACTAAAATCAAAGAT 3344
| ||| || | || || || ||| || |||||||| || || || || | |||
Sbjct 4580 GTTAATATGAAAGTTATTCCATATGCAGAACAATATACATTCTGTACAGAAGTTCGTGAT 4521
Query 3345 ATCGATGACAATGTTATTTATCTAAGAGAAGATATGTTTTATAAAGAAA-ACATGCAACG 3403
| || || || | || ||| ||| |||| | || | ||||||||| |||||||| |
Sbjct 4520 GTTGAGGATAAAGCTACCTATTTAAAAGAAAACATCT---ATAAAGAAACACATGCAAAG 4464
Query 3404 TTATTACTACAATCCAAGTAATTTATATTTTGACAATGCTTATTCAAAAAATTACGTGGT 3463
|| | || || || ||| ||| ||||||| || || ||||||||| || | ||
Sbjct 4463 AAAT-ATTATAAACCGTCTAACTTACATTTTGATAACGCCTATTCAAAATCATATATTGT 4405
Query 3464 TGATAATGATAGA-TANNNNNNNNNNNNNNNgaataaaattataaaatttcatataaaaa 3522
| | ||| ||| | || || ||| |||||||||| | || | |
Sbjct 4404 TAACAAT-ATACAATACATTGATTTAAACATTAACAAAGTTATAAAATTGTACATTACAC 4346
Query 3523 atgaaatgaagaaaaacatcaac-gaatttgaaagaaaagaaaaaatatacgaagataac 3581
| | | || |||| |||| || ||||||||| | |||||||| ||||||||||||
Sbjct 4345 AACAGAAAAAATTAAACC-CAACTGATTTTGAAAGACACGAAAAAATGTACGAAGATAAC 4287
Query 3582 tatattgaaaataCAAAGAA-------GT------------ATT-TAAT--------GAA 3613
||||| |||| || ||||| || ||| |||| |||
Sbjct 4286 TATATAGAAAGAACTAAGAAAAACCTTGTTAAACAAATGAGATTATAATTGCGTGACGAA 4227
Query 3614 ACAATACGGCTTATAA-----------------AAGGTGTGTAAGATTATGGGATTACTT 3656
|| ||| ||||| |||| |||||||| ||||||||| |
Sbjct 4226 ACGCAACGTGATATAATTGTTTTATTAGCAATTAAGGAGTGTAAGAC-ATGGGATTATTG 4168
Query 3657 GAGTGTATGCAATATCATAAACATCAACGCAAAATGATATTGTATTGGGATATTGAAACA 3716
||| |||||| |||||| ||| ||||||| || |||||||||||||||||
Sbjct 4167 GAGGCAATGCAAACACATAAAGGCTTACGTAAAATGACGTTATATTGGGATATTGAAACC 4108
Query 3717 TTATCATACAATAAAATAAATGGACGTAATAAACCAACGCTATATAAAAACGTAACGTAT 3776
||| ||||||| || ||| | ||| | || ||||||| ||||||||||| |||
Sbjct 4107 TTAGCATACAACAAGATAGAGGGAAGAAAACAACCAACTGACTATAAAAACGTTGTTTAT 4048
Query 3777 TCTGTTGCAATAGGTTGGTTTAATGGTTACGAA--ATTGATGTTGAAGTATTCCCCAGTT 3834
||| || | |||||| |||| | ||| ||||| ||||| || || ||| ||
Sbjct 4047 AGTGTAGCTGTTGGTTGGGATAATCA--AGGAACAATTGACGTTGAGGTTTTTCCCTCTT 3990
Query 3835 TTGAAGCCTTTTATGATGATTTTTACAAGTATGTTAATCGCCGTGATACAATCACAAAAT 3894
|| | | || | | | || | ||||||| | ||| || ||||| || ||||
Sbjct 3989 TTAACTCATTCTTTAAAACATTCTTTAAGTATGCAGAACGCAAAGACACAATAACGAAAT 3930
Query 3895 CAAAAACAAATATTATCATGATTGCACATAACTGTAATAAATACGATAATCATTTTTTAC 3954
| ||| ||| |||||||| |||||||||||||| || || ||||| |||||||
Sbjct 3929 CTCGTACATCAATTGAAATGATTGCGCATAACTGTAATAAGTATGACAATCACTTTTTAC 3870
Query 3955 TTAAAGACACTATGCGTTATTTTGA---TAATATTACACGCAAAAATGTATATTTGAAAT 4011
|| | || ||| | || || | |||| | | | ||||| | | ||||||
Sbjct 3869 TTCACGA---TATACAACATATTTACCCTAATGTAAAAGTTGAAAATTTGTTCATGAAAT 3813
Query 4012 CTGCAGAAGAAAATGAACATACAATAAAAATTCAAGAGGTTACTATTTTAGCCAAAAATC 4071
| |||||| ||||||| | || | || || |||| | || | || ||| |
Sbjct 3812 CAGCAGAAACAAATGAAAACACTGTTAATATGAAAGAAGCTAAAACAGACGCTAAAGAAG 3753
Query 4072 AAAATGTGATTTTAGAAAAACGCGTTAAATCTTCAATCAATTTAGATTTAACAATGTTTT 4131
| ||| | ||||||||||||| |||||||||||||| |||||||| | | | || |
Sbjct 3752 ATAATATTGTTTTAGAAAAACGTGTTAAATCTTCAATTAATTTAGACCTTATTTTTTTCT 3693
Query 4132 TAAACGGTTTTAAATTTAATATCATTGATAACTTTATGAAAACCAACACATCTATTGCAA 4191
|| | |||||||||||| | |||||||||| |||||||| | ||||||||||| |
Sbjct 3692 TACAAGGTTTTAAATTTGTCGTTGTTGATAACTTCATGAAAACAACAACATCTATTGCCA 3633
Query 4192 CATTAGGTAAGAAATTACTTGACGGGGGTTATTTAACAGAAAACCAACTTAAAACAGATT 4251
||||||| || ||| | ||||| || ||| | ||| | |||||||||||||||| |
Sbjct 3632 CATTAGGAAAAAAACTCAAAGACGGTGGATATCTTACATCAGACCAACTTAAAACAGACT 3573
Query 4252 TTAATTATACAATTTTTGATAAAGATAACGATATGTCAGATAGTGAAGCTTATGACTATG 4311
|| | ||| || ||||||| || | |||||| ||| ||| ||||| || |
Sbjct 3572 TTCAATATGATATCTTTGATATTGAAGAGGATATGGATGATGTAGAAAGTTATGCTTACG 3513
Query 4312 CTGTTAAGTGTTTTGATAATCTTACATC-TGAACAATTAACCTACATTCATAATGACGTG 4370
|| | | |||||| | || || | || ||| ||| | || |||||| | ||||||||
Sbjct 3512 CTTATGAATGTTTTAAAAAACT-AGATAATGACCAAATGACTTACATTAACAATGACGTT 3454
Query 4371 ATAATATTAGGTATGTGCCATATTCATTATAGTGACATTTTTCCAAATTTTGATTATAAC 4430
|| || |||||| || ||||| |||||| ||| || || ||||| |||||||||
Sbjct 3453 ATTATTTTAGGTCAATGTCATATACATTATTCTGATATATTCCCAAACTTTGATTATTCA 3394
Query 4431 AAATTAACATTTTCACTAAATATCATGGAATCTTACTTGAATAACGAAATGACGCGTTTC 4490
||| | || ||| |||| ||| | ||| ||| |||| || || | || ||||
Sbjct 3393 AAAATGACGTTTAGTGTAAACATCTTAGAAAGTTATATGAACAATGATTTTACCGGTTTT 3334
Query 4491 CAATTATTAAATCAATATGGAGATATTAAAATATCTTACACACATTACCAATTCCATGAT 4550
||| || | ||| || || ||| || || |||||| |||| | || |||| |
Sbjct 3333 CAACTACTTAATAAAATAGGCGATGGACGTATTTCATACACAGATTATTATTTTCATGGT 3274
Query 4551 ATGAATTTTTATGACTATATTAAATCATTCTATCGTGGTGGTTTAAATATGTATAACACC 4610
|| ||||||||||||| ||| || || |||||||||||||||||||||| |
Sbjct 3273 CGTAACCTTTATGACTATATCAAAGGTTTTTACAATGGTGGTTTAAATATGTATAACCCT 3214
Query 4611 AAATACATCAATAAACTTATTGATGAGCCATGTTTTTCAATTGATATTAATTCGAGTTAT 4670
|||||||| || ||||| ||||||| |||||||| |||||||| |||||| |||
Sbjct 3213 AAATACATTGGACAAATTATTAATGAGCCTTGTTTTTCTATTGATATAAATTCGTCATAT 3154
Query 4671 CCTTATGTGATGTATCATGAGAAAATTCCGACTTGGTTATACTTTTATGA 4720
|||||||| ||||||||||||||||| || |||| |||| | ||||||
Sbjct 3153 CCTTATGTAATGTATCATGAGAAAATACCAACTTACTTATCTTCTTATGA 3104
Score = 365 bits (404), Expect = 5e-97
Identities = 521/722 (72%), Gaps = 15/722 (2%)
Strand=Plus/Minus
Query 4976 TGAATGTGAATACTTTCATGCACGTGATATTATTTTTCAAAATTATTTTATTAAAACACA 5035
||| |||||||| ||| ||| | ||||| || |||| |||||||||||||||||
Sbjct 2836 TGACTGTGAATATTTTGGTGCTAGGGATATCATACACGAAAACTATTTTATTAAAACACA 2777
Query 5036 AGGTAAGTTAAAAAATAAAATCAATATGACATCACCTTACGACTATCATATCACTGATGA 5095
|||||| | |||| ||||| ||||| | ||||||| |||||| ||||| || ||
Sbjct 2776 AGGTAAACTCAAAACCAAAATAGATATGCCTACACCTTATGACTATACAATCACAGACGA 2717
Query 5096 CATCAACGAA-CACCC-ATACTCAAATGAGGAGGTTATGTTGTCAAAAGTAGTACTCAAT 5153
|| ||| || ||| | | ||| || |||||||| |||||||| ||||| |||
Sbjct 2716 GCCAAATGAAACAGTTTATAGTGA--TGAAGAAGTTATGTTATCAAAAGTTGTACTTAAT 2659
Query 5154 GGTTTATATGGCATACCTGCATTACGTTCACATTTTAATTTATTTCGTTTAGATGAAAAT 5213
|| |||||||| || ||||| |||||||||| ||||||||||| ||| ||||||| |
Sbjct 2658 GGATTATATGGTATTCCTGCCCTACGTTCACACTTTAATTTATTCCGTAAAGATGAAGAC 2599
Query 5214 AACGAATTGTATAACATTATTAACGGTTATAAAAACACAGAACGTAATATTTTATTTTCT 5273
|| |||||||| ||||| ||||| ||||| |||||||| ||||| ||||| |||
Sbjct 2598 GGTTTTTTATATAACATGATTAATGGTTACAAAAATACAGAACGAAATATATTATTCTCT 2539
Query 5274 ACATTTGTAACATCACGTTCATTGTATAACTTATTAGTACCATTCCAATATTTAACGGAA 5333
|| ||||| || |||| ||| | ||||| || | | ||||| ||| | ||||| ||
Sbjct 2538 ACCTTTGTTACGTCACAATCACTTTATAATCTACTTGAGCCATTACAAGACTTAACACAA 2479
Query 5334 AGTGAAATTGACGACAATTTTATTTATTGTGACACTGATAGTTTGTATATGAAATCCGTT 5393
| |||||||||||||| ||||| || ||||| || |||||||| ||| | ||||| |
Sbjct 2478 AAAGAAATTGACGACAACTTTATATACTGTGATACAGATAGTTTATATCTTAAATCAGCG 2419
Query 5394 GTTAAA-CCCTTATTGA-ACCCCAGTTTATTCGACCCGATAGCCTTAGGTAAATGGGATA 5451
||||| ||||| | || || |||||||||||| | ||||||||||||||
Sbjct 2418 ATTAAAGATAAGATTGACGCTTCAATT--TTCGACCCGATATCGTTAGGTAAATGGGACG 2361
Query 5452 TTGAAAACGAACAGATAGATAAGATGTTTGTACTGAATCATAAGAAATATGCATA---TG 5508
|||| || || | || || || |||| |||| | || |||||||||||||| || |
Sbjct 2360 TTGAGAATGACCGTATTGAAAAAATGTATGTATTAAACCATAAGAAATATGCTTACCTTA 2301
Query 5509 AAGTGAATGGAAAGATTAAAATAGCCTCAGCTGGTATACCGAAAAACGCCTTTGATACAA 5568
|| || ||||| || | |||| || ||| | ||| | |||| ||| | || |
Sbjct 2300 AACCAAACGGAAAAATCCATGTAGCAAGCGCAGGTGTGCCGTTAGACGCGTTTAACAC-A 2242
Query 5569 GTGTCGAT--TTTGAAACCTTTGTACGTGAACAATTCTTTGACGGTGCCATTATTGAAAA 5626
| | | || || || |||| | | | | || | ||||||| |||| | ||
Sbjct 2241 GAG-CAATCATTCGAGGACTTTATTAATAATGACTTTCATCACGGTGCTGTTATCTACAA 2183
Query 5627 CAATAAAAGTATCTATAATGCTCAAGGTACAATATCGATATATCCGTCTAAAACTGAAAT 5686
|||||||||||||||||| |||||||| || || ||||||||||| |||| | ||
Sbjct 2182 TAATAAAAGTATCTATAATAAACAAGGTACCATTTCAATATATCCGTCAGAAACACATAT 2123
Query 5687 TG 5688
||
Sbjct 2122 TG 2121
Score = 104 bits (114), Expect = 3e-18
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 7522 AATTTATCTTTAATTTGTTCTGGCACTAACACGTCCATTTCTGCACAATTTTCTACGATA 7581
||||||||||||||||||||||| | | || | ||||||||| ||||||||| |||
Sbjct 154 AATTTATCTTTAATTTGTTCTGGAAATGGTACATTCATTTCTGCTAAATTTTCTAATATA 95
Query 7582 GATAACCCCTCATTAGCGATATAATAGAAAATCGTAATCATGAGTAAGCCACCTTTTAAT 7641
||| ||||| |||| || |||||||| || ||| || | ||| |||| |||||
Sbjct 94 CTTAAACCCTCTGTAGCAATGTAATAGAACATGATAACTATTACTAATGCACCGTTTAAG 35
Query 7642 TGTAAAATCTGGTCTATAATGTTTGCTAGAAT 7673
| ||| || | ||| ||||| || | || |||
Sbjct 34 TTTAATATGTTGTCAATAATATTAGATATAAT 3
>seq2740
Length=4841
Score = 109 bits (120), Expect = 6e-20
Identities = 197/282 (70%), Gaps = 6/282 (2%)
Strand=Plus/Plus
Query 7508 TTTTAATTACTCTTAATTTATCTTTAATTTGTTCTGGCACTAACACGTCCATTTCTGCAC 7567
||||||| ||| | ||| || ||||| | || ||||| || ||||||| || |
Sbjct 1255 TTTTAATAACTTGAAGTTTTTCAGCAATTTCCTTAGGAACTAATACACCCATTTCAGCGC 1314
Query 7568 AATTTTCTACGATAGATAACCCCTCATTAGCGATATAATAGAAAATCGTAATCATGAGTA 7627
|||||||||| || ||| || ||||| || | ||||| | | |||||||| | |
Sbjct 1315 AATTTTCTACAATGCTTAATCCTTCATTTGCTAAGTAATAAAGTAATGTAATCATTAACA 1374
Query 7628 AGCCACCTTTTAATTGTAAAATCTGGTCTATAATGTTTGCTAGAATGATAATACAGAATA 7687
||||| |||| | | || || |||||||| || |||| ||| |||||||| ||||
Sbjct 1375 GTCCACCATTTAGCTCAAGTATTTGATCTATAATATTAGCTAAAATAATAATACA-AATA 1433
Query 7688 TCAATAattttttagcaaagcctttcattgattttttagaccatagattattatttttaa 7747
||| | |||| | ||||| || ||| ||||| | |||| || ||| ||||||
Sbjct 1434 TCATCATTTTTCTCGCAAA-CCAAACATGGATTTACGACTCCAT--ATGATTTGTTTTAA 1490
Query 7748 ttgctttagCAAAACCAGTAATAACATCAACAATCATTAAAA 7789
|||||| || | ||||||| | ||| | | ||||||||
Sbjct 1491 ATGCTTTTGC-CATCCAGTAA-CATATCTAAATCCATTAAAA 1530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 57021021749600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |