Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq2189 131 2e-25 seq2024 109 6e-19 >seq2189 Length=7749 Score = 131 bits (144), Expect = 2e-25 Identities = 78/82 (95%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 7440 AAATGGCACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTA 7499 Query 66460 TCCAGCTGAGCTAAGAGTGCAT 66481 ||||||||||||||| | |||| Sbjct 7500 TCCAGCTGAGCTAAGGGCGCAT 7521 >seq2024 Length=8047 Score = 109 bits (120), Expect = 6e-19 Identities = 72/80 (90%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 66401 AATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTAT 66460 |||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 7745 AATGGCACGCCCTGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTAT 7804 Query 66461 CCAGCTGAGCTAAGAGTGCA 66480 ||| |||||||||| | ||| Sbjct 7805 CCAACTGAGCTAAGGGCGCA 7824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521959054923000