Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_031046.1
Length=17641
Score E
Sequences producing significant alignments: (Bits) Value
seq2572 847 0.0
seq2620 500 1e-137
seq2740 120 3e-23
seq1498 89.7 6e-14
>seq2572
Length=8270
Score = 847 bits (938), Expect = 0.0
Identities = 1429/2040 (70%), Gaps = 58/2040 (3%)
Strand=Plus/Minus
Query 14406 TACAATTACTTGTACATCCTTATCAAATTTAAGCATTTTTTGCATAAATTGAAATTCATC 14465
||| ||| || ||||| | ||||| | || |||||| || |||||| | |||
Sbjct 2020 TACGATTTTTTTAACATCATCGTCAAAACGCATCACTTTTTGAATGAATTGATAATCAAA 1961
Query 14466 ATCATAAAAGGTTAATTTATCGTTATTTACAAATTCATTAAAACCTTTTTTAATCAGTTC 14525
| || || |||||||| ||||||| |||||||||||||| |||||| || | |||
Sbjct 1960 GTTATCAATGGTTAATTGTCCGTTATTAACAAATTCATTAAATCCTTTTCTATCTAATTC 1901
Query 14526 TGACTTTATAAAATCATATAATGTCATGGTATATCTAGCCATTTACATCAC-TACTT--T 14582
|| || | ||| |||| || | ||||||||||||| || | ||| | | | |
Sbjct 1900 ACTCTCAATGATTTCAAATAAGGTTGTTGTATATCTAGCCACTTGTACCACCTCCGTAGT 1841
Query 14583 CATCTTTAAACAGTGTATCAACCATTGAAATTTTAGACGTAGTTTCATCATCATAATACG 14642
|| || || ||| | | || || | | || || | ||||||||||||||| |
Sbjct 1840 TGTCGGTAGCCA-TGTTTTGAATATCGACTTGT--GATGTTGCTTCATCATCATAATAAG 1784
Query 14643 GTT-TAATATCTAAACCATAACGTTTTGATAAAAATGTAATCGGTTCACGTCCTTTTAAA 14701
| | |||| ||||| || |||||| ||| | | || |||||| ||| |||||
Sbjct 1783 GGTGTAAT-TCTAACCCGAAACGTTGGTTTAACATTTCTATACTTTCACGACCTCTTAAA 1725
Query 14702 TAAATATTACTATTTGACGTAGTAAAACCACGATTACTTTTCGCTTCTTCATCAGATACA 14761
||||| || || ||||| ||||| ||| |||||||| |||||| |||| |||
Sbjct 1724 TAAATGTTTGAGTTAGACGTTGTAAATGAACGGTTACTTTTTGCTTCTGTATCACTCACA 1665
Query 14762 CCGCTTTCTTTATCAACAGCGAGTGAATTTATGCCTAAATAGTTACTTAATTCACTGATT 14821
|||||||||||||||||||| | || || | ||||| ||||| || |||||| |||
Sbjct 1664 CCGCTTTCTTTATCAACAGCTAAAGAGTTAACACCTAAGAAGTTAGATAGTTCACTTATT 1605
Query 14822 TTATTCTGATATTCTCGCTTCATTTCTGTTAAAGCAGGAATCACTGAATTACTTGTTAAA 14881
|| || ||||||||||| |||||||| | ||| | || ||| ||||| |||
Sbjct 1604 TTGTTTTGATATTCTCGTTTCATTTCAACGAGTGCATTGTTAACGTAATCACTTGCTAAG 1545
Query 14882 TCAATAATATCATCATCTGCGTTGAACAT--CGGTGACATCTTAACAAATGGTGCGCCGT 14939
|| ||||| || || || || | || | | | || | ||| || |||| ||| |
Sbjct 1544 TCTATAATGTCCTCTTCAGCATCAAATAATCCACTTACTT--TAATGAAAGGTGAGCCAT 1487
Query 14940 TATAA-ATTTCTGATACAAGTTGATTAATTGATTCATCGTTAATATCTGATTTAAATATC 14998
|| || | || | | | ||||||||||| ||||||||||| || ||||| |||||
Sbjct 1486 TAAAACAATTGAGTGATGAATTGATTAATTGTTTCATCGTTAACTTCCGATTTGAATATT 1427
Query 14999 TTGCTGAATTTTGCTTGCATAATCAATGAAAAACGAGATAAAACAACCTCAGCTAATTCA 15058
|| ||||| | ||||||||| | |||||||||| ||||| | || |||||||||
Sbjct 1426 TTAGCAAATTTGGATTGCATAATAAGTGAAAAACGACTTAAAATGATTTCTGCTAATTCA 1367
Query 15059 TCTGTATAATGTTCTATAATTTCAATATCACTATTATATTGAATC-GGTTTATTTTGCAT 15117
|| ||| ||| |||||| || ||| |||| || || | ||||||||| |||
Sbjct 1366 TCACAATAGTGTGAAATAATTGCATAGTCATTATT-TAGTGTTACTGGTTTATTTCTCAT 1308
Query 15118 AACAACAAAATTTCCACTCATGCAATTATCGTATTGCTTATGAATTTGTAGACATTCATC 15177
||||| ||||| || | ||||| || || | | | |||| || | | |||
Sbjct 1307 AACAATAAAATCACCTGATTTACAATTGTCATAATATT---GTATTTCTAAAGCGTAATC 1251
Query 15178 AGGTATTAAATAGTCTGGAACAATGAAATAAATATCATCTTTTGTTAATCGTTTTTGAAA 15237
||| ||| || | |||| | | ||| || || | | ||||||| || |||
Sbjct 1250 AGGGCGTAAGTATTTAGGAATAGTAAAACGTATGTCTTTCTCGTTTAATCGGCGTTCAAA 1191
Query 15238 TTGGAAGTTAAAGTTAGATGAGAAATTTGGTGCT-TGGTTAAAATAAGTATTGTTAACAT 15296
|||||||||||| | | ||| | || | ||| ||| | |||| | | ||
Sbjct 1190 AGCAAAGTTAAAGTTATTTAA-AAAGTCACCACTATTTTTATAATGATTATTTTCTATAT 1132
Query 15297 AACCAAGAATCATAATTTGTTTATTTCTCGCTTCTCCTACCACAACATTAATGTTTTGTC 15356
|||| || ||||||||||| | |||||| || | || || || || | | ||| |
Sbjct 1131 AACCTAGTATCATAATTTGGTCATTTCTAGCCTTACCAACAACTACCTGATAACCTTGAC 1072
Query 15357 TTAATGCAGATTCTAACTGAATAAAATCTATACCAACCGTATCACGATTGGTATAGTTTA 15416
|||||||| |||||| || | |||||||||| || || ||| |||||||| |
Sbjct 1071 GTAATGCAGTTTCTAATTGTAAAAAATCTATAGACACGCTACGTTTATTTGTATAGTTAA 1012
Query 15417 TTAGTAGGGGTAAAAATTCCAAATAACGATTAAACATAAGACGTTTAAAACGGTTACGAT 15476
| |||||||||| ||||||||||||||||||||| ||||| | ||| || || | ||
Sbjct 1011 TCAGTAGGGGTAGAAATTCCAAATAACGATTAAAAATAAGCCTACGAAATCGATTTCTAT 952
Query 15477 GTTCAACTACTCTT----TTAT---------TAATT-TGTTTTGACAGTTCAACATATAA 15522
|||| | || | |||| ||| | ||||| || |||||| |
Sbjct 951 GTTCGATAACACGCAGGCTTATGTCCTCAGATAACTCTGTTTCAACGC--CAACATGTTC 894
Query 15523 ACCTCTTT-----TGTTA--TTTGTCATAATTTAC-CTCCTAT---GTTTCACTATCTGG 15571
|| | ||| || || |||||||| || || ||||| | ||| || |||||
Sbjct 893 AC-TATTTGAATGTGATAGATTTGTCATG-TTAACGCTCCTTTAAAGTTATTCT-TCTGG 837
Query 15572 TTCTGGTTTAGGTGTTACATCTTGGTC---AGTAATTAAAATTTTGTTAAAGAATGGACT 15628
|| | |||| | | || | || ||| |||||||||||||| ||||||||
Sbjct 836 GTCC---TCAGGTTGTTCCTCAGGCTCTGAAGTGATTAAAATTTTGTTGAAGAATGGTGA 780
Query 15629 TACAGCTTTAAATGAATAGTAATGTATCCAATGTGTAACCTCATCATACTCACCATTATA 15688
|||| ||| || || || ||||||||||||||||| |||||| | ||||| |||||
Sbjct 779 AACAGATTTGAAGCTGTAATAGTGTATCCAATGTGTAACTTCATCAAATTCACCGTTATA 720
Query 15689 GAATGGTTGTTTTAACATACCTTTTGTATAGCGTTTATATTTAATTGAATTAATATCCAA 15748
|||||||| ||| | |||||| ||||||| ||||| ||||| | | |||||||| ||
Sbjct 719 GAATGGTTTTTTAAGCATACCGTTTGTATTACGTTTGTATTTCAAAGCGTTAATATCGAA 660
Query 15749 AATAAACGCATATAAATCTGATTTTGGTTTGATTTCTTCAACGTTACCTGTAAACTCTTT 15808
||| || || ||| || | ||||| | ||| || ||||| ||| || |
Sbjct 659 AATGAAAGCGAATAGGTCACTATCAGGTTTAACCTCTGTTACATTACCAACAAATTCAGT 600
Query 15809 AAGTTTTGAAACGTCATAAGTGAATACAGCATCTAAAGGAATAGTATCACCGATTTGTGC 15868
||| ||||| |||| |||| || | | | ||| ||| ||||||| ||||| ||
Sbjct 599 TTGTTGTGAAATGTCAAAAGTAAAAGTTGTACCCTCAGGGATAATATCACCAATTTGAGC 540
Query 15869 TTGATAATCACCGTAAGCACGTAAGAAATCAATTGTATCTTGATTTTGTAATTTAAATTC 15928
||||||||||||| || |||||||| | ||||| || | | || |||| | | ||
Sbjct 539 TTGATAATCACCGAAACCACGTAAGTAGGTGATTGTGTCATTTTCTTCTAATGTTACATC 480
Query 15929 TTTCATTACTTTAAACACACCGCCTAAATCATCAAAGCTAATAACATGGTCTGTGAAGTC 15988
| || ||| ||||||||||||| || ||||||||||| ||||||||||| |||||
Sbjct 479 ATCAGTTGTTTTGTACACACCGCCTAAGTCGTCAAAGCTAATTACATGGTCTGTAAAGTC 420
Query 15989 AATACCAGCGATTTGGAAAGTGTTCGCAATTTTTGTATCTAATAAATAAGATTTTAATGA 16048
||| || | |||||| ||||| |||||||||||||||||||| | ||||| |
Sbjct 419 AATGCCTGATGCTTGGAATGTGTTAGCAATTTTTGTATCTAATAAGAATGATTTAATACT 360
Query 16049 ATCTGTTGTTAAAATAACAATGTCTTTTAACTTAGACACAGTTGTGTATTGACCAATAGC 16108
|||||||||||||||| |||| || || ||||| || |||||||| ||||||| |
Sbjct 359 ATCTGTTGTTAAAATAGCAATATCAGACAATTTAGAAACTGTTGTGTAACGACCAATTGA 300
Query 16109 ACCACCAGAAGCACGATGTACCTCATTATATTTAGCGCTGTTGTTTTGTAAGTTGAGAAT 16168
||||| |||||| || | ||||| ||||| | ||||| ||||| | ||| || |
Sbjct 299 CCCACCTGAAGCAGTATTAGCTTCATTGTATTTGTCACTGTTATTTTGCATGTTTAGTAC 240
Query 16169 AGCTTCAAAAACTTTACTTGCTAAATCTTCTTTTGATGTTGTTTTGCGTATGTTTGAATC 16228
||||||||| |||||||||||||||||||||| |||||| | | || || ||||| ||
Sbjct 239 AGCTTCAAATACTTTACTTGCTAAATCTTCTTGTGATGTAGCGTAACGAATATTTGAGTC 180
Query 16229 TGATAATTGATTTAACGAGTAATCAACTAACATTGCTCTCATTTCTTTTTCTTCTAATAC 16288
|||||||| || | | || ||||| | ||| || | ||||||||||||||| |||
Sbjct 179 AGATAATTGGTTAATTGCATAGTCAACAACCATGGCACGGATTTCTTTTTCTTCTTCTAC 120
Query 16289 ATTAATATCAGAAATTTTCTTTTTATAAACACCTAACGCATAATTTGTAGCGTCTGCTAA 16348
|||||||||||||| || || || | || ||| ||||| ||||||||||| ||||
Sbjct 119 GTTAATATCAGAAATCTTTTTCTTCAATACTGCTAGGGCATAGTTTGTAGCGTCACCTAA 60
Query 16349 -TGTTTGAAAATTAAAACGAACGTCGTTGTTGTTTAATGTGAAtttttgtttttttACAA 16407
| |||| || |||||||| | ||||| || |||||||| |||||||||||||| ||||
Sbjct 59 GTCTTTG-AAGTTAAAACGTGCATCGTTATTATTTAATGTAAATTTTTGTTTTTTAACAA 1
Score = 589 bits (652), Expect = 2e-164
Identities = 1084/1572 (69%), Gaps = 36/1572 (2%)
Strand=Plus/Minus
Query 8562 GGTACACTAATTTTCATCGTTAAACCGTTAATGCTATTTGCGATTTGGAATGCATTTCCC 8621
|||| || |||||||| |||||||||||||| ||||| || |||||||| ||||| |||
Sbjct 8188 GGTATACCGATTTTCATTGTTAAACCGTTAATACTATTCGCAATTTGGAAAGCATTACCC 8129
Query 8622 ATTTCTGATTCAGTCACTGACGGGGGTTGTAAGGCTAAATCTTTATATTCTGCCTGTTGT 8681
|||| | ||| |||||| |||||||| |||| |||||||||||||| |||||
Sbjct 8128 ATTTGACTTGAAGTTGTTGACGGTGGTTGTAAAGCTAGGTCTTTATATTCTGCTTGTTGG 8069
Query 8682 TGTTTGTAGAAATTATATTCTTCATTAAACTTACCAAATAAAGCCGTTGGACTTAAATTA 8741
| || || | | ||||| |||||||| |||| |||||| || || || | |||
Sbjct 8068 TTTTGATAATATGTGTATTCATCATTAAATTTACTAAATAATTGTGTCGGGCTGATATTG 8009
Query 8742 CTTGCTACACTTACAGCGTCATAAAAACGTGATTTTGGGTCACTACCATTTAATACATTA 8801
||| | |||| | | ||||| || ||||| ||| ||| | | |||
Sbjct 8008 GATGCAATACTTGCCACATCATAGAATTTAGATTTAATGTCGTCACCTGTAGCAATATTT 7949
Query 8802 TCTATACGATTTGTAATTAATTGACTTTCTGCATTACGCTGTCTATTGGCTTGTTGTGAT 8861
| ||||||||| |||||||||||||||||||| | | || ||||||||||||
Sbjct 7948 TGCGCACGATTTGTTATTAATTGACTTTCTGCATTTTTCACACGGTTAGCTTGTTGTGAT 7889
Query 8862 TGTCCTAAAATTCCGTTATTAATTAATATAGGTACTTGCGCAAAACTATTAAATGTTATA 8921
|||||||| || || |||| |||||| | ||||||| ||||| |||| |||||| ||
Sbjct 7888 TGTCCTAATATACCATTATCAATTAACACTGGTACTTCAGCAAAGCTATCAAATGTAATT 7829
Query 8922 TTTGTATTTAAGAATGAACCTGTATCAATTAATATATCTTTATTTTTAGCAAGTATCGGT 8981
|| ||||||||||| ||||| || || ||||| || ||| | | || |||
Sbjct 7828 GCAGTGTTTAAGAATGACCCTGTGTCTATCAATATCTCACCATTGGTTGATTTAATGGGT 7769
Query 8982 CTATCATTTTCAGCACTGTTATAATCTACTGGATAAACTCGAACTTCATTATGATAACCA 9041
|| |||| | ||||||| || || ||||||| || ||||||||||||| ||||
Sbjct 7768 TGTTCTGCTTCACCTTTGTTATAGTCAACGGGATAAATTCTAACTTCATTATGAAAACCG 7709
Query 9042 ATAATAGATTTTGTTCTTAGTTTCACGCCTGTTTTTTCTGAAATTTTACCAGCGTCGAGT 9101
||||| ||||| ||||| | ||||| ||||||| || || || || ||||| | |
Sbjct 7708 ATAATTGATTTCGTTCTAAACTTCACACCTGTTTCGGGTGTTATCTTCCCTGCGTCTAAT 7649
Query 9102 AACATTGTATTCCCATTCCAATCATAAAATTCAATCGTCATGTACTCATTACGTATCATA 9161
||||| | | || ||||| ||||| ||| || || | || |||||||| | | |
Sbjct 7648 AACATAGCGTCACCGTTCCATGAATAAACTTCTATTGTAAAATATTCATTACGGACTAAA 7589
Query 9162 TGCTTAAATTCATCTTTTTTAGACAACATCATCTCTTGAAGCTTTG-AGAAACTTAATGA 9220
|| | |||| || || || | | | || || || | ||||| |
Sbjct 7588 TGACGTAGTTCAGGTTGATT-GATACCTGCTAAATTTAAAAATTCGTTAAAACTCATATT 7530
Query 9221 TAAATCGTTTAAACTCCATTCTTTTGATTTTCCACCTTGTTTTAACGTCTTTAATCCAGT 9280
||||| || |||| ||| || ||| |||||| || || ||||| |
Sbjct 7529 TAAATTAGGTAGTGACCATGTTTTAGAACGGCCATTACTTTTTAATGTGTTCAATCCTTT 7470
Query 9281 ANNNNNNNNNNNNNNNNNNNNNNNCTCTAAATCTTTTTTATTAATAAAGTCTTTAGGTAT 9340
| ||||||| | ||| |||||| | || ||||||
Sbjct 7469 AATATCTTCATCGGTTTTGACACTTACTAAATCACTACTATCAATAAACTTTTCAGGTAT 7410
Query 9341 CATTTGAACCTTTTGAAAGTTTTGTGTAATCCATGGATAGGCACTCATTTTATCCATAAA 9400
|||||| | ||||| |||||||| ||||||||||| || |||||||||||||||||
Sbjct 7409 CATTTGTATTTTTTGGAAGTTTTGAGTAATCCATGGGTATTTGCTCATTTTATCCATAAA 7350
Query 9401 ATTGATAAAATCCCCGTATTCCATGACGTATAAGTTAACTGGTGATGTGATATTGTCATA 9460
||| | ||||| | | ||||| |||||| |||||||| || |||| ||||||
Sbjct 7349 ATTAACAAAATTTGAATGTGACATGATGTATAAATTAACTGGACTCGTCATATAGTCATA 7290
Query 9461 TATCGTACCTTTAGACGTATCTAAGTTTGGCTCTTTTTTCGTACCAAATTTCTTTGATAA 9520
| ||||| || ||||||| || ||||||||||| |||| ||||| || |||||
Sbjct 7289 AGTTAATCCTTTTGAACTATCTAAATTAGGCTCTTTTTTACTACCGAATTTTTTAGATAA 7230
Query 9521 ATCAGCGCTTGACTGGA--ATAACACTAAAT-TTTCCAAATACTGTTGCATTTGGTTATA 9577
||||| ||||| || | |||||| || | || |||||| |||| | | |||
Sbjct 7229 GTCAGCACTTGATTGAAACATAACA-TAGTTGTTACCAAAT--TGTTCTAAGTAGTTTCT 7173
Query 9578 CACATAGTTTTTATTCGATACTTTTAACACATCATCATTGTTACGTAACATTGGTAACAT 9637
||||| |||||| | |||| || ||||||||||| |||||||| ||||||||
Sbjct 7172 TGAATAGTATTTATTTGTCGCTTTCAATACATCATCATTATTACGTAAATAAGGTAACAT 7113
Query 9638 ATAGTTATACGTGCG-TTTTGATAAGTGTTGACGTTCAATATTAACG-TTTGAGAGTTGC 9695
|| | ||| || | ||||| ||| ||||||||||| | | || ||||| |||
Sbjct 7112 GTATTCATA-TTGAGATTTTGGTAAATGTTGACGTTCCACACGTGCGTTTTGAATGTT-A 7055
Query 9696 TCTAATACATTACCTTGCGTGTACGTCATAATAGTATCAATCACAAAATATATTTTAACC 9755
||| ||||||||||| || || ||||| || || ||||| || ||| |||| ||
Sbjct 7054 GATAAAACATTACCTTGTGTATAAGTCATGATTGTGTCAATAACCAAAGTCATTTGAATT 6995
Query 9756 ACAACATCATTCACATATTCGATTTGATTCACAAACGCGTAATAGCGTCTATCCTCAAAA 9815
||| ||| || | |||||| || ||| ||||| |||||||| ||||||| ||||||
Sbjct 6994 ACATTATCGTTAATATATTCAATCGCATTAACAAAAGCGTAATAACGTCTATTCTCAAAC 6935
Query 9816 TCTGATAAAAACGTCATGTAGTTAATCCCTTGTGCATTATGCCACTGCATAT---CAACA 9872
||||| ||||| |||||||| ||||| || | | ||| | ||| | ||
Sbjct 6934 CCTGATTTGAACGTACAATAGTTAATACCTTGAGCTTCACTCCAATTCATTTGTGGTACT 6875
Query 9873 TTGATTTCCAT---TCTATCACGTATAAAATTATACGGTTGTTTTGAATAGTCTAA-CGA 9928
|| | | || | || |||||||||||| | || |||| || |||| |
Sbjct 6874 TTAA---CAATGGAGCGGTCGCGTATAAAATTAAATGGGATTTTTTCGTA-ACTAATTGC 6819
Query 9929 TTTAAAATGACGACCATTTAAAAAATAATCATCACGTTCTTTATTACTATTAAAATGAAT 9988
||||||||| | ||||||| |||| ||||||||||||| |||||| ||||||| ||
Sbjct 6818 TTTAAAATGTCCACCATTT-AAAAGTAATCATCACGTTGCGCATTACTGCTAAAATGTAT 6760
Query 9989 CGTGTTTTGATAGTCTG-TAAACGGTGTGTTATAGAAAAATTTAAAATTTGTTAATTTTC 10047
|||||||||||| |||| |||| ||||||| ||||||||| ||| | || | ||||
Sbjct 6759 CGTGTTTTGATAATCTGTTAAAAGGTGTGTCATAGAAAAACACAAATTCTGAT-GTTTTG 6701
Query 10048 T----CAT--TTTTACCTCC-ATA---AAAAATAGTCGTATAAATAATTTATACGACTAT 10097
| ||| ||| |||||| ||| ||||||| | ||| | | | ||| |||
Sbjct 6700 TAAGCCATTATTTAACCTCCTATATATAAAAATAAGCACATACAAACTGTATGTACTTAT 6641
Query 10098 TATATCATTTTT 10109
||||||||||||
Sbjct 6640 TATATCATTTTT 6629
>seq2620
Length=5891
Score = 500 bits (554), Expect = 1e-137
Identities = 777/1099 (71%), Gaps = 17/1099 (2%)
Strand=Plus/Minus
Query 4038 AAGGTGTGTAAGATTATGGGATTACTAGAATGCATGAAATATCATAAACATGAACGTCGA 4097
|||| |||||||| ||||||||| | || ||| || |||||| |||| |
Sbjct 4193 AAGGAGTGTAAGAC-ATGGGATTATTGGAGGCAATGCAAACACATAAAGGCTTACGTAAA 4135
Query 4098 ATGATTTTATACTGGGATATAGAAACATTAGCGTACAATAAAGTTAACGGACGaaaaaaa 4157
|||| ||||| |||||||| ||||| ||||| ||||| || | | ||| ||||| ||
Sbjct 4134 ATGACGTTATATTGGGATATTGAAACCTTAGCATACAACAAGATAGAGGGAAGAAAACAA 4075
Query 4158 CCAACCAAATATAAAAACGTAACGTATTCAGTAGCAATTGGTTGGTTTAATGGTTATGAG 4217
||||| | ||||||||||| ||| ||||| |||||||| |||| | ||
Sbjct 4074 CCAACTGACTATAAAAACGTTGTTTATAGTGTAGCTGTTGGTTGGGATAATCA--AGGAA 4017
Query 4218 --ATTGATGTAGAAGTATTTCCTAGTTTTGAATCGTTTTATGACGCATTTTATACGTATG 4275
||||| || || || ||||| |||| | || || | | | |||| | || |||||
Sbjct 4016 CAATTGACGTTGAGGTTTTTCCCTCTTTTAACTCATTCTTTAAAACATTCTTTAAGTATG 3957
Query 4276 TGAAACGACGTGATACAATCACTAAGTCAAAAACAGATATTATCATGATTGCACATAACT 4335
|||| || ||||| || || || ||| ||| |||||||| |||||||
Sbjct 3956 CAGAACGCAAAGACACAATAACGAAATCTCGTACATCAATTGAAATGATTGCGCATAACT 3897
Query 4336 GTAATAAGTATGACAACCATTTTTTACTTAAAGATACCATGCGTTATTTTGA---TAATA 4392
|||||||||||||||| || ||||||||| | |||| | | || || | ||||
Sbjct 3896 GTAATAAGTATGACAATCACTTTTTACTTCACGATA---TACAACATATTTACCCTAATG 3840
Query 4393 TCACACGTGAAAATATATATTTAAAATCTGCAGAAGAAAACGAACACACACTAAAGATGC 4452
| | | ||||||| | | | ||||| |||||| ||| ||| |||| | || |||
Sbjct 3839 TAAAAGTTGAAAATTTGTTCATGAAATCAGCAGAAACAAATGAAAACACTGTTAATATGA 3780
Query 4453 AAGAGGCTACTATTTTAGCTAAAAATCAAAATGTGATTTTAGAAAAACGTGTGAAATCGT 4512
|||| |||| | |||||| | | ||| | |||||||||||||||| ||||| |
Sbjct 3779 AAGAAGCTAAAACAGACGCTAAAGAAGATAATATTGTTTTAGAAAAACGTGTTAAATCTT 3720
Query 4513 CTATTAATTTAGACTTAACAATGTTTTTAAATGGATTTAAAATTAATATTATTGATAACT 4572
| |||||||||||| | | | || ||| | || |||||| || || |||||||||
Sbjct 3719 CAATTAATTTAGACCTTATTTTTTTCTTACAAGGTTTTAAATTTGTCGTTGTTGATAACT 3660
Query 4573 TTATGAAAACAAATACATCAATTGCAACATTAGGTAAAAAGTTGCTTGACGGTGGTTATT 4632
| |||||||||| ||||| ||||| |||||||| ||||| | |||||||| |||
Sbjct 3659 TCATGAAAACAACAACATCTATTGCCACATTAGGAAAAAAACTCAAAGACGGTGGATATC 3600
Query 4633 TAACAGACGACCAACTTAAAACAGATTTTAATTACACGATATTTGATAAAGATAACGACA 4692
| ||| ||||||||||||||||| ||| | || || ||||||| || | || |
Sbjct 3599 TTACATCAGACCAACTTAAAACAGACTTTCAATATGATATCTTTGATATTGAAGAGGATA 3540
Query 4693 TGTCAGATAGTGAAGCCTATGACTATGCCGTAAAGTGTTTTGCTAAACTCACACCTGAAC 4752
|| ||| ||| |||| || || | |||||| ||||| ||| |
Sbjct 3539 TGGATGATGTAGAAAGTTATGCTTACGCTTATGAATGTTTTAAAAAACTAGATAATGACC 3480
Query 4753 AACTTACATACATTCATAATGACGTTATTATATTAGGTATGTGCCATATTCATTATAGTG 4812
|| | || |||||| | |||||||||||||| |||||| || ||||| |||||| ||
Sbjct 3479 AAATGACTTACATTAACAATGACGTTATTATTTTAGGTCAATGTCATATACATTATTCTG 3420
Query 4813 ATATATTTCCAAATTTTGACTATAACAAATTAACATTTTCATTGAATATTATGGAATCGT 4872
||||||| ||||| ||||| ||| ||| | || ||| | || || | ||| |
Sbjct 3419 ATATATTCCCAAACTTTGATTATTCAAAAATGACGTTTAGTGTAAACATCTTAGAAAGTT 3360
Query 4873 ATTTAAATAATCAAATGACGCGTTTTCAGTTACTCAATCAATATCAAGATATTAAAATAT 4932
|| | || ||| | | || ||||||| |||| ||| || || | | || | |||
Sbjct 3359 ATATGAACAATGATTTTACCGGTTTTCAACTACTTAATAAA-AT-AGGCGATGGACGTAT 3302
Query 4933 --CATATACACATTATCATTTCCATGATATGAATTTTTATGATTATATCAAATCATTTTA 4990
|||| ||| ||||| |||| |||| | || ||||||| ||||||||| |||||
Sbjct 3301 TTCATACACAGATTATTATTTTCATGGTCGTAACCTTTATGACTATATCAAAGGTTTTTA 3242
Query 4991 TCGTGGTGGTTTAAATATGTATAACACTAAATACATAA-ACAAACTTATTGATGAGCCTT 5049
|||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||
Sbjct 3241 CAATGGTGGTTTAAATATGTATAACCCTAAATACATTGGACAAA-TTATTAATGAGCCTT 3183
Query 5050 GTTTTTCTATTGATATCAATTCCAGTTATCCTTATGTGATGTATCATGAGAAAATTCCGA 5109
|||||||||||||||| ||||| ||||||||||| ||||||||||||||||| || |
Sbjct 3182 GTTTTTCTATTGATATAAATTCGTCATATCCTTATGTAATGTATCATGAGAAAATACCAA 3123
Query 5110 CATGGTTATACTTTTATGA 5128
| | |||| | ||||||
Sbjct 3122 CTTACTTATCTTCTTATGA 3104
Score = 381 bits (422), Expect = 7e-102
Identities = 780/1148 (68%), Gaps = 38/1148 (3%)
Strand=Plus/Minus
Query 2744 TTTAATACTGTAAACGACATTATAAACTATTATAAGGAG--CAAAAACATGGTGAAACAA 2801
|||||| | |||| || ||||||||||||||| |||| || ||||||| ||||
Sbjct 5520 TTTAATTCAATAAATGATATTATAAACTATTAT--GGAGGTCATAAACATG----AACAG 5467
Query 2802 AATCGTTTAGACATGGTAAGAGATTATCAAAATGCTGTCAATCATGTCAGaaaaaaa-aT 2860
| | |||| || | | | |||||||| | | | || || || |||| || ||
Sbjct 5466 ACT-----AGACGAAGTCAAACAATATCAAAACG-TATTAAACAAGTTTCAAAAGAAGAT 5413
Query 2861 ACCAGATAACTATAATCAAATAGAATTAGTTGATGAACTCATGAATGATGATATAGACTA 2920
||| | || || |||||||||||| | | | | ||||| ||||| | ||||| || |
Sbjct 5412 ACCCAAAAAGTACAATCAAATAGAACTTGCTAACGAACTTATGAACAAAGATATTGATTT 5353
Query 2921 TTACATATCTATTTCAAACCGTTCTGACGGAAAATCGTTCAACTATGTTTCATNNNNNNN 2980
|| ||||||||||| |||||||| ||||| ||| | || ||||| ||||||
Sbjct 5352 TTTAATATCTATTTCCAACCGTTCAGACGGTAAAACATTTAACTACATTTCATTTTTTAT 5293
Query 2981 NNNNNNNGCTATAAAACTTGATATTAAATTTACTTTATTATCACGTCATTATACATTACG 3040
|||| || | | ||| |||||| || | ||||||| ||||| ||||
Sbjct 5292 GAAACTATCTATCGAATTAGGTATAAAATTTGTATTGATTGCACGTCACTATACCCTACG 5233
Query 3041 TGACGCTTATCGTGATTTTATTGAGGAAAT---CATAGACAAAAACCCACTATTCAAATC 3097
| |||| || ||||| | || | |||| ||| || | | ||| | |||
Sbjct 5232 TAACGCCTACCGTGAACTGATAAATAAAATAGCCATGGAGCATGATG-ACTTT--AAAGA 5176
Query 3098 TAAGCGTGTCACATTCA-GAAGCGCTAGG--GACTATTTAGCTATCATCTATCAAGATAA 3154
|| | | ||| | | |||| | |||||| | | | ||| | |||
Sbjct 5175 AAAA---GACTTATTTATGCAGCGTACAGATGACTATATTAATGTTGGTTAT---GGTAA 5122
Query 3155 GGAAATCG---GTGTGATTACAGATTTGAATAGTGCAACTGATTTAAAATATCATTCTAA 3211
|||| | || | |||||||| || || | ||| ||||||||||||||||| |||||
Sbjct 5121 AGAAAGCATGTGTATTATTACAGACTTAAACAATGCGACTGATTTAAAATATCACTCTAA 5062
Query 3212 CTTTTTAAAACACTACCCTATCATTATATATGATGAATTTTTAGCACTTGAAGATGACTA 3271
|||||||||| | || || |||||| ||||||||||||| ||||| | ||| ||| ||
Sbjct 5061 CTTTTTAAAAGATTATCCAATCATTGTATATGATGAATTCCTAGCATTAGAAAGTGATTA 5002
Query 3272 TTTAATTGACGAGTGGGATAAGTTAAAAACAATTTATGAATCAATCGACCGTAACCATGG 3331
||| || || ||||| || | ||||| || ||||| || || ||||||||||| ||
Sbjct 5001 CTTACCAGATGAATGGGACAAACTTAAAACCATATATGAGTCTATAGACCGTAACCACGG 4942
Query 3332 TAATGTTGATTATATCGGCTTCCCTAAAATGTTTTTATTAGGTAATGCAGTCAACTTTTC 3391
||| | ||| | | | |||||||| | || |||||||||||||| ||||||||
Sbjct 4941 GAATATACCCTATTTGGAAATACCTAAAATAGTATTGTTAGGTAATGCAGTTAACTTTTC 4882
Query 3392 AAGTCCTATATTATCCAATTTAAATATATATAACTTATTACAAAAACATAAAATGAACAC 3451
||||| || | | || ||||| |||| || | | | ||||| ||||| ||| |
Sbjct 4881 TAGTCCCCTACTTGCGAACTTAAACATATTCAATAAACTTGAGAAACACAAAATCAACTC 4822
Query 3452 ATCACGACTTTACAAAAACAtttttttAGAAATGCGAAGAAACGATTACGTAAATGAAAA 3511
|| | || || | || | |||||| || | || || | |||||||||
Sbjct 4821 TATGCGTCAGTATGGTAATGTATTACTTGAAATGAGACGTAATGACAATTCAAATGAAAA 4762
Query 3512 GCGTAACACACGGGCATTCAATTCAAACGATGACGCTATGACTACTGGCGAGTTTGAATT 3571
||||| || |||| ||| | || |||| || ||||| || || || ||||| ||
Sbjct 4761 ACGTAATACTAGGGCTTTCGACAGTGACAATGATGCAATGACAACCGGTGAATTTGATTT 4702
Query 3572 TAACGAATATAATTTAGCAGATGATAATTTAAGAAATCATATCAATCAAAACGGTGATTT 3631
|||| | || |||||||| ||||| ||| | |||||||| | | |||||||||||||
Sbjct 4701 TAACAATTACAATTTAGCCGATGACGGATTACGCAATCATATTAGTAAAAACGGTGATTT 4642
Query 3632 TTTCTATATTAAAACTGACGATAAATATATAAAAATTATGTATAATGTTGATACATTTAA 3691
||||| || ||||| || ||| |||||| ||| | |||||||| || | | ||
Sbjct 4641 CTTCTACATCAAAACCGAAGATGCATATATTAAAGTGATGTATAACGTGAACGACTATAC 4582
Query 3692 TGCTAATATTATTGTTATACCTTATACAAAACAATATGAATTTTGTACTAAAATCAAAGA 3751
| |||||| | ||||| || ||| || |||||||| ||| ||||| || | ||
Sbjct 4581 AGTTAATATGAAAGTTATTCCATATGCAGAACAATATACATTCTGTACAGAAGTTCGTGA 4522
Query 3752 TATAGATGACAATGTTATTTATTTAAGAGAAGATATGTTTTATAAAGAAA-ACATGGAGC 3810
| | || || || | || ||||||| |||| | | | |||||||||| ||||| |
Sbjct 4521 TGTTGAGGATAAAGCTACCTATTTAAAAGAAAACA---TCTATAAAGAAACACATGCAAA 4465
Query 3811 GTTATTATTACAATCCAAGCAATTTAAATTTTGATAACGCTTACTCAAAAAATTACGTTG 3870
| | ||||| || || || ||| ||||||||||||| || |||||| || |||
Sbjct 4464 G-AAATATTATAAACCGTCTAACTTACATTTTGATAACGCCTATTCAAAATCATATATTG 4406
Query 3871 TTGATAAT 3878
|| | |||
Sbjct 4405 TTAACAAT 4398
Score = 358 bits (396), Expect = 8e-95
Identities = 515/719 (72%), Gaps = 9/719 (1%)
Strand=Plus/Minus
Query 5384 TGAATGTGAATACTTTCATGCACGTGATATTATATTTCAAAACTATTTTATTAAAACACA 5443
||| |||||||| ||| ||| | ||||| ||| ||||||||||||||||||||||
Sbjct 2836 TGACTGTGAATATTTTGGTGCTAGGGATATCATACACGAAAACTATTTTATTAAAACACA 2777
Query 5444 AGGTAAGTTAAAAAACAAAATCAACATGACATCACCTTACGACTATCATATTACTGATGA 5503
|||||| | |||| |||||| | ||| | ||||||| |||||| || || || ||
Sbjct 2776 AGGTAAACTCAAAACCAAAATAGATATGCCTACACCTTATGACTATACAATCACAGACGA 2717
Query 5504 CATCAACGAACACCCTTACTCAAATGATGAGGTTATGTTGTCTAAAGTTGTACTTAACGG 5563
|| ||| ||| |||| || |||||||| || |||||||||||||| ||
Sbjct 2716 GCCAAATGAAACAGTTTATAGTGATGAAGAAGTTATGTTATCAAAAGTTGTACTTAATGG 2657
Query 5564 ATTATATGGCATACCTGCATTACGTTCACATTTTAACTTATTCCGTTTAGATGATAACAA 5623
||||||||| || ||||| |||||||||| ||||| ||||||||| |||||| ||
Sbjct 2656 ATTATATGGTATTCCTGCCCTACGTTCACACTTTAATTTATTCCGTAAAGATGAAGACGG 2597
Query 5624 CGAACTATATAATATCATTAACGGTTACAAAAACACTGAACGTAATATATTATTCTCTAC 5683
||||||| || ||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct 2596 TTTTTTATATAACATGATTAATGGTTACAAAAATACAGAACGAAATATATTATTCTCTAC 2537
Query 5684 ATTTGTCACATCACGTTCATTATATAACTTATTGGTACCTTTCCAATACTTAACTGAAAA 5743
||||| || |||| ||| | ||||| || | | || || ||| ||||||| ||||
Sbjct 2536 CTTTGTTACGTCACAATCACTTTATAATCTACTTGAGCCATTACAAGACTTAACACAAAA 2477
Query 5744 TGAAATTGACGACAATTTTATTTATTGCGATACTGATAGTTTGTATATGAAATCCGTTGT 5803
|||||||||||||| ||||| || || ||||| |||||||| ||| | ||||| | |
Sbjct 2476 AGAAATTGACGACAACTTTATATACTGTGATACAGATAGTTTATATCTTAAATCAGCGAT 2417
Query 5804 TAAA-CCCTTATTGA-ACCCCAGTTTATTCGATCCGATAGCCTTAGGTAAATGGGATATT 5861
|||| ||||| | || || ||||| |||||| | |||||||||||||| ||
Sbjct 2416 TAAAGATAAGATTGACGCTTCAATT--TTCGACCCGATATCGTTAGGTAAATGGGACGTT 2359
Query 5862 GAAAACGAACAGATAGATAAGATGTTTGTACTGAATCATAAAAAATATGCATA---TGAA 5918
|| || || | || || || |||| |||| | || ||||| |||||||| || | ||
Sbjct 2358 GAGAATGACCGTATTGAAAAAATGTATGTATTAAACCATAAGAAATATGCTTACCTTAAA 2299
Query 5919 GTGAATGGAAAGATTAAAATTGCTTCTGCTGGTATACCTAAAAGCGCCTTTGATACA-AG 5977
|| ||||| || | | || || ||| | || | ||| ||| | ||| ||
Sbjct 2298 CCAAACGGAAAAATCCATGTAGCAAGCGCAGGTGTGCCGTTAGACGCGTTTAACACAGAG 2239
Query 5978 CGTCGATTTTGAAACCTTTGTACGTGAACAATTCTTTGACGGTGCGATAATAGAAAACAA 6037
| | || || |||| | | | | || | ||||||| | || | || ||
Sbjct 2238 CAATCA-TTCGAGGACTTTATTAATAATGACTTTCATCACGGTGCTGTTATCTACAATAA 2180
Query 6038 TAAAAGTATCTATAACGAACAGGGTACGATATCGATTTATCCGTCTAAAACAGAAATTG 6096
||||||||||||||| |||| ||||| || || || |||||||| ||||| | ||||
Sbjct 2179 TAAAAGTATCTATAATAAACAAGGTACCATTTCAATATATCCGTCAGAAACACATATTG 2121
Score = 104 bits (114), Expect = 3e-18
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 7929 AATTTATCTTTAATTTGATCTGGGACTAACACGTCCATTTCTGCACAATTTTCTACGATA 7988
||||||||||||||||| ||||| | | || | ||||||||| ||||||||| |||
Sbjct 154 AATTTATCTTTAATTTGTTCTGGAAATGGTACATTCATTTCTGCTAAATTTTCTAATATA 95
Query 7989 GATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCATGAGTAAGCCACCTTTTAAT 8048
||| ||||| |||| || |||||||| || ||| || | ||| |||| |||||
Sbjct 94 CTTAAACCCTCTGTAGCAATGTAATAGAACATGATAACTATTACTAATGCACCGTTTAAG 35
Query 8049 TGTAAAATCTGGTCAATGATGTTAGCTAAAAT 8080
| ||| || | |||||| || |||| || |||
Sbjct 34 TTTAATATGTTGTCAATAATATTAGATATAAT 3
>seq2740
Length=4841
Score = 120 bits (132), Expect = 3e-23
Identities = 203/288 (70%), Gaps = 6/288 (2%)
Strand=Plus/Plus
Query 7909 TATCATTTTTAATGACTCTTAATTTATCTTTAATTTGATCTGGGACTAACACGTCCATTT 7968
||||| ||||||| ||| | ||| || ||||| | || ||||| || ||||||
Sbjct 1249 TATCACTTTTAATAACTTGAAGTTTTTCAGCAATTTCCTTAGGAACTAATACACCCATTT 1308
Query 7969 CTGCACAATTTTCTACGATAGATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCA 8028
| || ||||||||||| || ||| || ||||| || | ||||| | | |||||||
Sbjct 1309 CAGCGCAATTTTCTACAATGCTTAATCCTTCATTTGCTAAGTAATAAAGTAATGTAATCA 1368
Query 8029 TGAGTAAGCCACCTTTTAATTGTAAAATCTGGTCAATGATGTTAGCTAAAATGATAATAC 8088
| | | ||||| |||| | | || || || || || ||||||||||| |||||||
Sbjct 1369 TTAACAGTCCACCATTTAGCTCAAGTATTTGATCTATAATATTAGCTAAAATAATAATAC 1428
Query 8089 AGAATATCAATAattttttagcaaaacctttcattgattttttagaccatagattattat 8148
| ||||||| | |||| | || ||||| ||| ||||| | |||| || |||
Sbjct 1429 A-AATATCATCATTTTTCTCGC-AAACCAAACATGGATTTACGACTCCAT--ATGATTTG 1484
Query 8149 ttttaattgctttagCAAAACCAGTAACAACATCTACAATCATCAAAA 8196
|||||| |||||| || | |||||||| | ||||| | ||| ||||
Sbjct 1485 TTTTAAATGCTTTTGC-CATCCAGTAAC-ATATCTAAATCCATTAAAA 1530
>seq1498
Length=16070
Score = 89.7 bits (98), Expect = 6e-14
Identities = 138/195 (71%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 6772 ACCATGTAATTGTGACATATACGCCCATGTTAATTCTGTACACTGA--CCTGCATTACCC 6829
||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||| | |
Sbjct 4770 ACCATGTAATTGTGACATATAAGCCCATGTTAACTCTGTACACTGACCCCTCAATTTCTC 4711
Query 6830 GTTTGAGGAAATATGTTACCTGGTTTGTATAAATATTCTTTTTTGAATAAAGGTACACCA 6889
|| | ||| | || || ||||| | ||||| ||| | ||| |||| ||
Sbjct 4710 ATT--ATCAAACACATTTCCGGGTTTATCCAAATAAGCTTCATCAAATTTAGGTGCAGTT 4653
Query 6890 ATTGCTTTTTTATATTTTTCTGGTAACTGTGCGTATGTCCAGTTACCACCAATGACGCGA 6949
|| ||||||||| |||||||| | || ||||| ||| || |||| || |
Sbjct 4652 ATATATTTTTTATACTTTTCTGGAACCTTATCGTATTCCCAATTTTTTTCAATAACTTTA 4593
Query 6950 CCACTTTTACCATTA 6964
|| | |||||||||
Sbjct 4592 CCTTTCTTACCATTA 4578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 56317216499100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |