Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_031046.1 Length=17641 Score E Sequences producing significant alignments: (Bits) Value seq2572 847 0.0 seq2620 500 1e-137 seq2740 120 3e-23 seq1498 89.7 6e-14 >seq2572 Length=8270 Score = 847 bits (938), Expect = 0.0 Identities = 1429/2040 (70%), Gaps = 58/2040 (3%) Strand=Plus/Minus Query 14406 TACAATTACTTGTACATCCTTATCAAATTTAAGCATTTTTTGCATAAATTGAAATTCATC 14465 ||| ||| || ||||| | ||||| | || |||||| || |||||| | ||| Sbjct 2020 TACGATTTTTTTAACATCATCGTCAAAACGCATCACTTTTTGAATGAATTGATAATCAAA 1961 Query 14466 ATCATAAAAGGTTAATTTATCGTTATTTACAAATTCATTAAAACCTTTTTTAATCAGTTC 14525 | || || |||||||| ||||||| |||||||||||||| |||||| || | ||| Sbjct 1960 GTTATCAATGGTTAATTGTCCGTTATTAACAAATTCATTAAATCCTTTTCTATCTAATTC 1901 Query 14526 TGACTTTATAAAATCATATAATGTCATGGTATATCTAGCCATTTACATCAC-TACTT--T 14582 || || | ||| |||| || | ||||||||||||| || | ||| | | | | Sbjct 1900 ACTCTCAATGATTTCAAATAAGGTTGTTGTATATCTAGCCACTTGTACCACCTCCGTAGT 1841 Query 14583 CATCTTTAAACAGTGTATCAACCATTGAAATTTTAGACGTAGTTTCATCATCATAATACG 14642 || || || ||| | | || || | | || || | ||||||||||||||| | Sbjct 1840 TGTCGGTAGCCA-TGTTTTGAATATCGACTTGT--GATGTTGCTTCATCATCATAATAAG 1784 Query 14643 GTT-TAATATCTAAACCATAACGTTTTGATAAAAATGTAATCGGTTCACGTCCTTTTAAA 14701 | | |||| ||||| || |||||| ||| | | || |||||| ||| ||||| Sbjct 1783 GGTGTAAT-TCTAACCCGAAACGTTGGTTTAACATTTCTATACTTTCACGACCTCTTAAA 1725 Query 14702 TAAATATTACTATTTGACGTAGTAAAACCACGATTACTTTTCGCTTCTTCATCAGATACA 14761 ||||| || || ||||| ||||| ||| |||||||| |||||| |||| ||| Sbjct 1724 TAAATGTTTGAGTTAGACGTTGTAAATGAACGGTTACTTTTTGCTTCTGTATCACTCACA 1665 Query 14762 CCGCTTTCTTTATCAACAGCGAGTGAATTTATGCCTAAATAGTTACTTAATTCACTGATT 14821 |||||||||||||||||||| | || || | ||||| ||||| || |||||| ||| Sbjct 1664 CCGCTTTCTTTATCAACAGCTAAAGAGTTAACACCTAAGAAGTTAGATAGTTCACTTATT 1605 Query 14822 TTATTCTGATATTCTCGCTTCATTTCTGTTAAAGCAGGAATCACTGAATTACTTGTTAAA 14881 || || ||||||||||| |||||||| | ||| | || ||| ||||| ||| Sbjct 1604 TTGTTTTGATATTCTCGTTTCATTTCAACGAGTGCATTGTTAACGTAATCACTTGCTAAG 1545 Query 14882 TCAATAATATCATCATCTGCGTTGAACAT--CGGTGACATCTTAACAAATGGTGCGCCGT 14939 || ||||| || || || || | || | | | || | ||| || |||| ||| | Sbjct 1544 TCTATAATGTCCTCTTCAGCATCAAATAATCCACTTACTT--TAATGAAAGGTGAGCCAT 1487 Query 14940 TATAA-ATTTCTGATACAAGTTGATTAATTGATTCATCGTTAATATCTGATTTAAATATC 14998 || || | || | | | ||||||||||| ||||||||||| || ||||| ||||| Sbjct 1486 TAAAACAATTGAGTGATGAATTGATTAATTGTTTCATCGTTAACTTCCGATTTGAATATT 1427 Query 14999 TTGCTGAATTTTGCTTGCATAATCAATGAAAAACGAGATAAAACAACCTCAGCTAATTCA 15058 || ||||| | ||||||||| | |||||||||| ||||| | || ||||||||| Sbjct 1426 TTAGCAAATTTGGATTGCATAATAAGTGAAAAACGACTTAAAATGATTTCTGCTAATTCA 1367 Query 15059 TCTGTATAATGTTCTATAATTTCAATATCACTATTATATTGAATC-GGTTTATTTTGCAT 15117 || ||| ||| |||||| || ||| |||| || || | ||||||||| ||| Sbjct 1366 TCACAATAGTGTGAAATAATTGCATAGTCATTATT-TAGTGTTACTGGTTTATTTCTCAT 1308 Query 15118 AACAACAAAATTTCCACTCATGCAATTATCGTATTGCTTATGAATTTGTAGACATTCATC 15177 ||||| ||||| || | ||||| || || | | | |||| || | | ||| Sbjct 1307 AACAATAAAATCACCTGATTTACAATTGTCATAATATT---GTATTTCTAAAGCGTAATC 1251 Query 15178 AGGTATTAAATAGTCTGGAACAATGAAATAAATATCATCTTTTGTTAATCGTTTTTGAAA 15237 ||| ||| || | |||| | | ||| || || | | ||||||| || ||| Sbjct 1250 AGGGCGTAAGTATTTAGGAATAGTAAAACGTATGTCTTTCTCGTTTAATCGGCGTTCAAA 1191 Query 15238 TTGGAAGTTAAAGTTAGATGAGAAATTTGGTGCT-TGGTTAAAATAAGTATTGTTAACAT 15296 |||||||||||| | | ||| | || | ||| ||| | |||| | | || Sbjct 1190 AGCAAAGTTAAAGTTATTTAA-AAAGTCACCACTATTTTTATAATGATTATTTTCTATAT 1132 Query 15297 AACCAAGAATCATAATTTGTTTATTTCTCGCTTCTCCTACCACAACATTAATGTTTTGTC 15356 |||| || ||||||||||| | |||||| || | || || || || | | ||| | Sbjct 1131 AACCTAGTATCATAATTTGGTCATTTCTAGCCTTACCAACAACTACCTGATAACCTTGAC 1072 Query 15357 TTAATGCAGATTCTAACTGAATAAAATCTATACCAACCGTATCACGATTGGTATAGTTTA 15416 |||||||| |||||| || | |||||||||| || || ||| |||||||| | Sbjct 1071 GTAATGCAGTTTCTAATTGTAAAAAATCTATAGACACGCTACGTTTATTTGTATAGTTAA 1012 Query 15417 TTAGTAGGGGTAAAAATTCCAAATAACGATTAAACATAAGACGTTTAAAACGGTTACGAT 15476 | |||||||||| ||||||||||||||||||||| ||||| | ||| || || | || Sbjct 1011 TCAGTAGGGGTAGAAATTCCAAATAACGATTAAAAATAAGCCTACGAAATCGATTTCTAT 952 Query 15477 GTTCAACTACTCTT----TTAT---------TAATT-TGTTTTGACAGTTCAACATATAA 15522 |||| | || | |||| ||| | ||||| || |||||| | Sbjct 951 GTTCGATAACACGCAGGCTTATGTCCTCAGATAACTCTGTTTCAACGC--CAACATGTTC 894 Query 15523 ACCTCTTT-----TGTTA--TTTGTCATAATTTAC-CTCCTAT---GTTTCACTATCTGG 15571 || | ||| || || |||||||| || || ||||| | ||| || ||||| Sbjct 893 AC-TATTTGAATGTGATAGATTTGTCATG-TTAACGCTCCTTTAAAGTTATTCT-TCTGG 837 Query 15572 TTCTGGTTTAGGTGTTACATCTTGGTC---AGTAATTAAAATTTTGTTAAAGAATGGACT 15628 || | |||| | | || | || ||| |||||||||||||| |||||||| Sbjct 836 GTCC---TCAGGTTGTTCCTCAGGCTCTGAAGTGATTAAAATTTTGTTGAAGAATGGTGA 780 Query 15629 TACAGCTTTAAATGAATAGTAATGTATCCAATGTGTAACCTCATCATACTCACCATTATA 15688 |||| ||| || || || ||||||||||||||||| |||||| | ||||| ||||| Sbjct 779 AACAGATTTGAAGCTGTAATAGTGTATCCAATGTGTAACTTCATCAAATTCACCGTTATA 720 Query 15689 GAATGGTTGTTTTAACATACCTTTTGTATAGCGTTTATATTTAATTGAATTAATATCCAA 15748 |||||||| ||| | |||||| ||||||| ||||| ||||| | | |||||||| || Sbjct 719 GAATGGTTTTTTAAGCATACCGTTTGTATTACGTTTGTATTTCAAAGCGTTAATATCGAA 660 Query 15749 AATAAACGCATATAAATCTGATTTTGGTTTGATTTCTTCAACGTTACCTGTAAACTCTTT 15808 ||| || || ||| || | ||||| | ||| || ||||| ||| || | Sbjct 659 AATGAAAGCGAATAGGTCACTATCAGGTTTAACCTCTGTTACATTACCAACAAATTCAGT 600 Query 15809 AAGTTTTGAAACGTCATAAGTGAATACAGCATCTAAAGGAATAGTATCACCGATTTGTGC 15868 ||| ||||| |||| |||| || | | | ||| ||| ||||||| ||||| || Sbjct 599 TTGTTGTGAAATGTCAAAAGTAAAAGTTGTACCCTCAGGGATAATATCACCAATTTGAGC 540 Query 15869 TTGATAATCACCGTAAGCACGTAAGAAATCAATTGTATCTTGATTTTGTAATTTAAATTC 15928 ||||||||||||| || |||||||| | ||||| || | | || |||| | | || Sbjct 539 TTGATAATCACCGAAACCACGTAAGTAGGTGATTGTGTCATTTTCTTCTAATGTTACATC 480 Query 15929 TTTCATTACTTTAAACACACCGCCTAAATCATCAAAGCTAATAACATGGTCTGTGAAGTC 15988 | || ||| ||||||||||||| || ||||||||||| ||||||||||| ||||| Sbjct 479 ATCAGTTGTTTTGTACACACCGCCTAAGTCGTCAAAGCTAATTACATGGTCTGTAAAGTC 420 Query 15989 AATACCAGCGATTTGGAAAGTGTTCGCAATTTTTGTATCTAATAAATAAGATTTTAATGA 16048 ||| || | |||||| ||||| |||||||||||||||||||| | ||||| | Sbjct 419 AATGCCTGATGCTTGGAATGTGTTAGCAATTTTTGTATCTAATAAGAATGATTTAATACT 360 Query 16049 ATCTGTTGTTAAAATAACAATGTCTTTTAACTTAGACACAGTTGTGTATTGACCAATAGC 16108 |||||||||||||||| |||| || || ||||| || |||||||| ||||||| | Sbjct 359 ATCTGTTGTTAAAATAGCAATATCAGACAATTTAGAAACTGTTGTGTAACGACCAATTGA 300 Query 16109 ACCACCAGAAGCACGATGTACCTCATTATATTTAGCGCTGTTGTTTTGTAAGTTGAGAAT 16168 ||||| |||||| || | ||||| ||||| | ||||| ||||| | ||| || | Sbjct 299 CCCACCTGAAGCAGTATTAGCTTCATTGTATTTGTCACTGTTATTTTGCATGTTTAGTAC 240 Query 16169 AGCTTCAAAAACTTTACTTGCTAAATCTTCTTTTGATGTTGTTTTGCGTATGTTTGAATC 16228 ||||||||| |||||||||||||||||||||| |||||| | | || || ||||| || Sbjct 239 AGCTTCAAATACTTTACTTGCTAAATCTTCTTGTGATGTAGCGTAACGAATATTTGAGTC 180 Query 16229 TGATAATTGATTTAACGAGTAATCAACTAACATTGCTCTCATTTCTTTTTCTTCTAATAC 16288 |||||||| || | | || ||||| | ||| || | ||||||||||||||| ||| Sbjct 179 AGATAATTGGTTAATTGCATAGTCAACAACCATGGCACGGATTTCTTTTTCTTCTTCTAC 120 Query 16289 ATTAATATCAGAAATTTTCTTTTTATAAACACCTAACGCATAATTTGTAGCGTCTGCTAA 16348 |||||||||||||| || || || | || ||| ||||| ||||||||||| |||| Sbjct 119 GTTAATATCAGAAATCTTTTTCTTCAATACTGCTAGGGCATAGTTTGTAGCGTCACCTAA 60 Query 16349 -TGTTTGAAAATTAAAACGAACGTCGTTGTTGTTTAATGTGAAtttttgtttttttACAA 16407 | |||| || |||||||| | ||||| || |||||||| |||||||||||||| |||| Sbjct 59 GTCTTTG-AAGTTAAAACGTGCATCGTTATTATTTAATGTAAATTTTTGTTTTTTAACAA 1 Score = 589 bits (652), Expect = 2e-164 Identities = 1084/1572 (69%), Gaps = 36/1572 (2%) Strand=Plus/Minus Query 8562 GGTACACTAATTTTCATCGTTAAACCGTTAATGCTATTTGCGATTTGGAATGCATTTCCC 8621 |||| || |||||||| |||||||||||||| ||||| || |||||||| ||||| ||| Sbjct 8188 GGTATACCGATTTTCATTGTTAAACCGTTAATACTATTCGCAATTTGGAAAGCATTACCC 8129 Query 8622 ATTTCTGATTCAGTCACTGACGGGGGTTGTAAGGCTAAATCTTTATATTCTGCCTGTTGT 8681 |||| | ||| |||||| |||||||| |||| |||||||||||||| ||||| Sbjct 8128 ATTTGACTTGAAGTTGTTGACGGTGGTTGTAAAGCTAGGTCTTTATATTCTGCTTGTTGG 8069 Query 8682 TGTTTGTAGAAATTATATTCTTCATTAAACTTACCAAATAAAGCCGTTGGACTTAAATTA 8741 | || || | | ||||| |||||||| |||| |||||| || || || | ||| Sbjct 8068 TTTTGATAATATGTGTATTCATCATTAAATTTACTAAATAATTGTGTCGGGCTGATATTG 8009 Query 8742 CTTGCTACACTTACAGCGTCATAAAAACGTGATTTTGGGTCACTACCATTTAATACATTA 8801 ||| | |||| | | ||||| || ||||| ||| ||| | | ||| Sbjct 8008 GATGCAATACTTGCCACATCATAGAATTTAGATTTAATGTCGTCACCTGTAGCAATATTT 7949 Query 8802 TCTATACGATTTGTAATTAATTGACTTTCTGCATTACGCTGTCTATTGGCTTGTTGTGAT 8861 | ||||||||| |||||||||||||||||||| | | || |||||||||||| Sbjct 7948 TGCGCACGATTTGTTATTAATTGACTTTCTGCATTTTTCACACGGTTAGCTTGTTGTGAT 7889 Query 8862 TGTCCTAAAATTCCGTTATTAATTAATATAGGTACTTGCGCAAAACTATTAAATGTTATA 8921 |||||||| || || |||| |||||| | ||||||| ||||| |||| |||||| || Sbjct 7888 TGTCCTAATATACCATTATCAATTAACACTGGTACTTCAGCAAAGCTATCAAATGTAATT 7829 Query 8922 TTTGTATTTAAGAATGAACCTGTATCAATTAATATATCTTTATTTTTAGCAAGTATCGGT 8981 || ||||||||||| ||||| || || ||||| || ||| | | || ||| Sbjct 7828 GCAGTGTTTAAGAATGACCCTGTGTCTATCAATATCTCACCATTGGTTGATTTAATGGGT 7769 Query 8982 CTATCATTTTCAGCACTGTTATAATCTACTGGATAAACTCGAACTTCATTATGATAACCA 9041 || |||| | ||||||| || || ||||||| || ||||||||||||| |||| Sbjct 7768 TGTTCTGCTTCACCTTTGTTATAGTCAACGGGATAAATTCTAACTTCATTATGAAAACCG 7709 Query 9042 ATAATAGATTTTGTTCTTAGTTTCACGCCTGTTTTTTCTGAAATTTTACCAGCGTCGAGT 9101 ||||| ||||| ||||| | ||||| ||||||| || || || || ||||| | | Sbjct 7708 ATAATTGATTTCGTTCTAAACTTCACACCTGTTTCGGGTGTTATCTTCCCTGCGTCTAAT 7649 Query 9102 AACATTGTATTCCCATTCCAATCATAAAATTCAATCGTCATGTACTCATTACGTATCATA 9161 ||||| | | || ||||| ||||| ||| || || | || |||||||| | | | Sbjct 7648 AACATAGCGTCACCGTTCCATGAATAAACTTCTATTGTAAAATATTCATTACGGACTAAA 7589 Query 9162 TGCTTAAATTCATCTTTTTTAGACAACATCATCTCTTGAAGCTTTG-AGAAACTTAATGA 9220 || | |||| || || || | | | || || || | ||||| | Sbjct 7588 TGACGTAGTTCAGGTTGATT-GATACCTGCTAAATTTAAAAATTCGTTAAAACTCATATT 7530 Query 9221 TAAATCGTTTAAACTCCATTCTTTTGATTTTCCACCTTGTTTTAACGTCTTTAATCCAGT 9280 ||||| || |||| ||| || ||| |||||| || || ||||| | Sbjct 7529 TAAATTAGGTAGTGACCATGTTTTAGAACGGCCATTACTTTTTAATGTGTTCAATCCTTT 7470 Query 9281 ANNNNNNNNNNNNNNNNNNNNNNNCTCTAAATCTTTTTTATTAATAAAGTCTTTAGGTAT 9340 | ||||||| | ||| |||||| | || |||||| Sbjct 7469 AATATCTTCATCGGTTTTGACACTTACTAAATCACTACTATCAATAAACTTTTCAGGTAT 7410 Query 9341 CATTTGAACCTTTTGAAAGTTTTGTGTAATCCATGGATAGGCACTCATTTTATCCATAAA 9400 |||||| | ||||| |||||||| ||||||||||| || ||||||||||||||||| Sbjct 7409 CATTTGTATTTTTTGGAAGTTTTGAGTAATCCATGGGTATTTGCTCATTTTATCCATAAA 7350 Query 9401 ATTGATAAAATCCCCGTATTCCATGACGTATAAGTTAACTGGTGATGTGATATTGTCATA 9460 ||| | ||||| | | ||||| |||||| |||||||| || |||| |||||| Sbjct 7349 ATTAACAAAATTTGAATGTGACATGATGTATAAATTAACTGGACTCGTCATATAGTCATA 7290 Query 9461 TATCGTACCTTTAGACGTATCTAAGTTTGGCTCTTTTTTCGTACCAAATTTCTTTGATAA 9520 | ||||| || ||||||| || ||||||||||| |||| ||||| || ||||| Sbjct 7289 AGTTAATCCTTTTGAACTATCTAAATTAGGCTCTTTTTTACTACCGAATTTTTTAGATAA 7230 Query 9521 ATCAGCGCTTGACTGGA--ATAACACTAAAT-TTTCCAAATACTGTTGCATTTGGTTATA 9577 ||||| ||||| || | |||||| || | || |||||| |||| | | ||| Sbjct 7229 GTCAGCACTTGATTGAAACATAACA-TAGTTGTTACCAAAT--TGTTCTAAGTAGTTTCT 7173 Query 9578 CACATAGTTTTTATTCGATACTTTTAACACATCATCATTGTTACGTAACATTGGTAACAT 9637 ||||| |||||| | |||| || ||||||||||| |||||||| |||||||| Sbjct 7172 TGAATAGTATTTATTTGTCGCTTTCAATACATCATCATTATTACGTAAATAAGGTAACAT 7113 Query 9638 ATAGTTATACGTGCG-TTTTGATAAGTGTTGACGTTCAATATTAACG-TTTGAGAGTTGC 9695 || | ||| || | ||||| ||| ||||||||||| | | || ||||| ||| Sbjct 7112 GTATTCATA-TTGAGATTTTGGTAAATGTTGACGTTCCACACGTGCGTTTTGAATGTT-A 7055 Query 9696 TCTAATACATTACCTTGCGTGTACGTCATAATAGTATCAATCACAAAATATATTTTAACC 9755 ||| ||||||||||| || || ||||| || || ||||| || ||| |||| || Sbjct 7054 GATAAAACATTACCTTGTGTATAAGTCATGATTGTGTCAATAACCAAAGTCATTTGAATT 6995 Query 9756 ACAACATCATTCACATATTCGATTTGATTCACAAACGCGTAATAGCGTCTATCCTCAAAA 9815 ||| ||| || | |||||| || ||| ||||| |||||||| ||||||| |||||| Sbjct 6994 ACATTATCGTTAATATATTCAATCGCATTAACAAAAGCGTAATAACGTCTATTCTCAAAC 6935 Query 9816 TCTGATAAAAACGTCATGTAGTTAATCCCTTGTGCATTATGCCACTGCATAT---CAACA 9872 ||||| ||||| |||||||| ||||| || | | ||| | ||| | || Sbjct 6934 CCTGATTTGAACGTACAATAGTTAATACCTTGAGCTTCACTCCAATTCATTTGTGGTACT 6875 Query 9873 TTGATTTCCAT---TCTATCACGTATAAAATTATACGGTTGTTTTGAATAGTCTAA-CGA 9928 || | | || | || |||||||||||| | || |||| || |||| | Sbjct 6874 TTAA---CAATGGAGCGGTCGCGTATAAAATTAAATGGGATTTTTTCGTA-ACTAATTGC 6819 Query 9929 TTTAAAATGACGACCATTTAAAAAATAATCATCACGTTCTTTATTACTATTAAAATGAAT 9988 ||||||||| | ||||||| |||| ||||||||||||| |||||| ||||||| || Sbjct 6818 TTTAAAATGTCCACCATTT-AAAAGTAATCATCACGTTGCGCATTACTGCTAAAATGTAT 6760 Query 9989 CGTGTTTTGATAGTCTG-TAAACGGTGTGTTATAGAAAAATTTAAAATTTGTTAATTTTC 10047 |||||||||||| |||| |||| ||||||| ||||||||| ||| | || | |||| Sbjct 6759 CGTGTTTTGATAATCTGTTAAAAGGTGTGTCATAGAAAAACACAAATTCTGAT-GTTTTG 6701 Query 10048 T----CAT--TTTTACCTCC-ATA---AAAAATAGTCGTATAAATAATTTATACGACTAT 10097 | ||| ||| |||||| ||| ||||||| | ||| | | | ||| ||| Sbjct 6700 TAAGCCATTATTTAACCTCCTATATATAAAAATAAGCACATACAAACTGTATGTACTTAT 6641 Query 10098 TATATCATTTTT 10109 |||||||||||| Sbjct 6640 TATATCATTTTT 6629 >seq2620 Length=5891 Score = 500 bits (554), Expect = 1e-137 Identities = 777/1099 (71%), Gaps = 17/1099 (2%) Strand=Plus/Minus Query 4038 AAGGTGTGTAAGATTATGGGATTACTAGAATGCATGAAATATCATAAACATGAACGTCGA 4097 |||| |||||||| ||||||||| | || ||| || |||||| |||| | Sbjct 4193 AAGGAGTGTAAGAC-ATGGGATTATTGGAGGCAATGCAAACACATAAAGGCTTACGTAAA 4135 Query 4098 ATGATTTTATACTGGGATATAGAAACATTAGCGTACAATAAAGTTAACGGACGaaaaaaa 4157 |||| ||||| |||||||| ||||| ||||| ||||| || | | ||| ||||| || Sbjct 4134 ATGACGTTATATTGGGATATTGAAACCTTAGCATACAACAAGATAGAGGGAAGAAAACAA 4075 Query 4158 CCAACCAAATATAAAAACGTAACGTATTCAGTAGCAATTGGTTGGTTTAATGGTTATGAG 4217 ||||| | ||||||||||| ||| ||||| |||||||| |||| | || Sbjct 4074 CCAACTGACTATAAAAACGTTGTTTATAGTGTAGCTGTTGGTTGGGATAATCA--AGGAA 4017 Query 4218 --ATTGATGTAGAAGTATTTCCTAGTTTTGAATCGTTTTATGACGCATTTTATACGTATG 4275 ||||| || || || ||||| |||| | || || | | | |||| | || ||||| Sbjct 4016 CAATTGACGTTGAGGTTTTTCCCTCTTTTAACTCATTCTTTAAAACATTCTTTAAGTATG 3957 Query 4276 TGAAACGACGTGATACAATCACTAAGTCAAAAACAGATATTATCATGATTGCACATAACT 4335 |||| || ||||| || || || ||| ||| |||||||| ||||||| Sbjct 3956 CAGAACGCAAAGACACAATAACGAAATCTCGTACATCAATTGAAATGATTGCGCATAACT 3897 Query 4336 GTAATAAGTATGACAACCATTTTTTACTTAAAGATACCATGCGTTATTTTGA---TAATA 4392 |||||||||||||||| || ||||||||| | |||| | | || || | |||| Sbjct 3896 GTAATAAGTATGACAATCACTTTTTACTTCACGATA---TACAACATATTTACCCTAATG 3840 Query 4393 TCACACGTGAAAATATATATTTAAAATCTGCAGAAGAAAACGAACACACACTAAAGATGC 4452 | | | ||||||| | | | ||||| |||||| ||| ||| |||| | || ||| Sbjct 3839 TAAAAGTTGAAAATTTGTTCATGAAATCAGCAGAAACAAATGAAAACACTGTTAATATGA 3780 Query 4453 AAGAGGCTACTATTTTAGCTAAAAATCAAAATGTGATTTTAGAAAAACGTGTGAAATCGT 4512 |||| |||| | |||||| | | ||| | |||||||||||||||| ||||| | Sbjct 3779 AAGAAGCTAAAACAGACGCTAAAGAAGATAATATTGTTTTAGAAAAACGTGTTAAATCTT 3720 Query 4513 CTATTAATTTAGACTTAACAATGTTTTTAAATGGATTTAAAATTAATATTATTGATAACT 4572 | |||||||||||| | | | || ||| | || |||||| || || ||||||||| Sbjct 3719 CAATTAATTTAGACCTTATTTTTTTCTTACAAGGTTTTAAATTTGTCGTTGTTGATAACT 3660 Query 4573 TTATGAAAACAAATACATCAATTGCAACATTAGGTAAAAAGTTGCTTGACGGTGGTTATT 4632 | |||||||||| ||||| ||||| |||||||| ||||| | |||||||| ||| Sbjct 3659 TCATGAAAACAACAACATCTATTGCCACATTAGGAAAAAAACTCAAAGACGGTGGATATC 3600 Query 4633 TAACAGACGACCAACTTAAAACAGATTTTAATTACACGATATTTGATAAAGATAACGACA 4692 | ||| ||||||||||||||||| ||| | || || ||||||| || | || | Sbjct 3599 TTACATCAGACCAACTTAAAACAGACTTTCAATATGATATCTTTGATATTGAAGAGGATA 3540 Query 4693 TGTCAGATAGTGAAGCCTATGACTATGCCGTAAAGTGTTTTGCTAAACTCACACCTGAAC 4752 || ||| ||| |||| || || | |||||| ||||| ||| | Sbjct 3539 TGGATGATGTAGAAAGTTATGCTTACGCTTATGAATGTTTTAAAAAACTAGATAATGACC 3480 Query 4753 AACTTACATACATTCATAATGACGTTATTATATTAGGTATGTGCCATATTCATTATAGTG 4812 || | || |||||| | |||||||||||||| |||||| || ||||| |||||| || Sbjct 3479 AAATGACTTACATTAACAATGACGTTATTATTTTAGGTCAATGTCATATACATTATTCTG 3420 Query 4813 ATATATTTCCAAATTTTGACTATAACAAATTAACATTTTCATTGAATATTATGGAATCGT 4872 ||||||| ||||| ||||| ||| ||| | || ||| | || || | ||| | Sbjct 3419 ATATATTCCCAAACTTTGATTATTCAAAAATGACGTTTAGTGTAAACATCTTAGAAAGTT 3360 Query 4873 ATTTAAATAATCAAATGACGCGTTTTCAGTTACTCAATCAATATCAAGATATTAAAATAT 4932 || | || ||| | | || ||||||| |||| ||| || || | | || | ||| Sbjct 3359 ATATGAACAATGATTTTACCGGTTTTCAACTACTTAATAAA-AT-AGGCGATGGACGTAT 3302 Query 4933 --CATATACACATTATCATTTCCATGATATGAATTTTTATGATTATATCAAATCATTTTA 4990 |||| ||| ||||| |||| |||| | || ||||||| ||||||||| ||||| Sbjct 3301 TTCATACACAGATTATTATTTTCATGGTCGTAACCTTTATGACTATATCAAAGGTTTTTA 3242 Query 4991 TCGTGGTGGTTTAAATATGTATAACACTAAATACATAA-ACAAACTTATTGATGAGCCTT 5049 |||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||| Sbjct 3241 CAATGGTGGTTTAAATATGTATAACCCTAAATACATTGGACAAA-TTATTAATGAGCCTT 3183 Query 5050 GTTTTTCTATTGATATCAATTCCAGTTATCCTTATGTGATGTATCATGAGAAAATTCCGA 5109 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||| || | Sbjct 3182 GTTTTTCTATTGATATAAATTCGTCATATCCTTATGTAATGTATCATGAGAAAATACCAA 3123 Query 5110 CATGGTTATACTTTTATGA 5128 | | |||| | |||||| Sbjct 3122 CTTACTTATCTTCTTATGA 3104 Score = 381 bits (422), Expect = 7e-102 Identities = 780/1148 (68%), Gaps = 38/1148 (3%) Strand=Plus/Minus Query 2744 TTTAATACTGTAAACGACATTATAAACTATTATAAGGAG--CAAAAACATGGTGAAACAA 2801 |||||| | |||| || ||||||||||||||| |||| || ||||||| |||| Sbjct 5520 TTTAATTCAATAAATGATATTATAAACTATTAT--GGAGGTCATAAACATG----AACAG 5467 Query 2802 AATCGTTTAGACATGGTAAGAGATTATCAAAATGCTGTCAATCATGTCAGaaaaaaa-aT 2860 | | |||| || | | | |||||||| | | | || || || |||| || || Sbjct 5466 ACT-----AGACGAAGTCAAACAATATCAAAACG-TATTAAACAAGTTTCAAAAGAAGAT 5413 Query 2861 ACCAGATAACTATAATCAAATAGAATTAGTTGATGAACTCATGAATGATGATATAGACTA 2920 ||| | || || |||||||||||| | | | | ||||| ||||| | ||||| || | Sbjct 5412 ACCCAAAAAGTACAATCAAATAGAACTTGCTAACGAACTTATGAACAAAGATATTGATTT 5353 Query 2921 TTACATATCTATTTCAAACCGTTCTGACGGAAAATCGTTCAACTATGTTTCATNNNNNNN 2980 || ||||||||||| |||||||| ||||| ||| | || ||||| |||||| Sbjct 5352 TTTAATATCTATTTCCAACCGTTCAGACGGTAAAACATTTAACTACATTTCATTTTTTAT 5293 Query 2981 NNNNNNNGCTATAAAACTTGATATTAAATTTACTTTATTATCACGTCATTATACATTACG 3040 |||| || | | ||| |||||| || | ||||||| ||||| |||| Sbjct 5292 GAAACTATCTATCGAATTAGGTATAAAATTTGTATTGATTGCACGTCACTATACCCTACG 5233 Query 3041 TGACGCTTATCGTGATTTTATTGAGGAAAT---CATAGACAAAAACCCACTATTCAAATC 3097 | |||| || ||||| | || | |||| ||| || | | ||| | ||| Sbjct 5232 TAACGCCTACCGTGAACTGATAAATAAAATAGCCATGGAGCATGATG-ACTTT--AAAGA 5176 Query 3098 TAAGCGTGTCACATTCA-GAAGCGCTAGG--GACTATTTAGCTATCATCTATCAAGATAA 3154 || | | ||| | | |||| | |||||| | | | ||| | ||| Sbjct 5175 AAAA---GACTTATTTATGCAGCGTACAGATGACTATATTAATGTTGGTTAT---GGTAA 5122 Query 3155 GGAAATCG---GTGTGATTACAGATTTGAATAGTGCAACTGATTTAAAATATCATTCTAA 3211 |||| | || | |||||||| || || | ||| ||||||||||||||||| ||||| Sbjct 5121 AGAAAGCATGTGTATTATTACAGACTTAAACAATGCGACTGATTTAAAATATCACTCTAA 5062 Query 3212 CTTTTTAAAACACTACCCTATCATTATATATGATGAATTTTTAGCACTTGAAGATGACTA 3271 |||||||||| | || || |||||| ||||||||||||| ||||| | ||| ||| || Sbjct 5061 CTTTTTAAAAGATTATCCAATCATTGTATATGATGAATTCCTAGCATTAGAAAGTGATTA 5002 Query 3272 TTTAATTGACGAGTGGGATAAGTTAAAAACAATTTATGAATCAATCGACCGTAACCATGG 3331 ||| || || ||||| || | ||||| || ||||| || || ||||||||||| || Sbjct 5001 CTTACCAGATGAATGGGACAAACTTAAAACCATATATGAGTCTATAGACCGTAACCACGG 4942 Query 3332 TAATGTTGATTATATCGGCTTCCCTAAAATGTTTTTATTAGGTAATGCAGTCAACTTTTC 3391 ||| | ||| | | | |||||||| | || |||||||||||||| |||||||| Sbjct 4941 GAATATACCCTATTTGGAAATACCTAAAATAGTATTGTTAGGTAATGCAGTTAACTTTTC 4882 Query 3392 AAGTCCTATATTATCCAATTTAAATATATATAACTTATTACAAAAACATAAAATGAACAC 3451 ||||| || | | || ||||| |||| || | | | ||||| ||||| ||| | Sbjct 4881 TAGTCCCCTACTTGCGAACTTAAACATATTCAATAAACTTGAGAAACACAAAATCAACTC 4822 Query 3452 ATCACGACTTTACAAAAACAtttttttAGAAATGCGAAGAAACGATTACGTAAATGAAAA 3511 || | || || | || | |||||| || | || || | ||||||||| Sbjct 4821 TATGCGTCAGTATGGTAATGTATTACTTGAAATGAGACGTAATGACAATTCAAATGAAAA 4762 Query 3512 GCGTAACACACGGGCATTCAATTCAAACGATGACGCTATGACTACTGGCGAGTTTGAATT 3571 ||||| || |||| ||| | || |||| || ||||| || || || ||||| || Sbjct 4761 ACGTAATACTAGGGCTTTCGACAGTGACAATGATGCAATGACAACCGGTGAATTTGATTT 4702 Query 3572 TAACGAATATAATTTAGCAGATGATAATTTAAGAAATCATATCAATCAAAACGGTGATTT 3631 |||| | || |||||||| ||||| ||| | |||||||| | | ||||||||||||| Sbjct 4701 TAACAATTACAATTTAGCCGATGACGGATTACGCAATCATATTAGTAAAAACGGTGATTT 4642 Query 3632 TTTCTATATTAAAACTGACGATAAATATATAAAAATTATGTATAATGTTGATACATTTAA 3691 ||||| || ||||| || ||| |||||| ||| | |||||||| || | | || Sbjct 4641 CTTCTACATCAAAACCGAAGATGCATATATTAAAGTGATGTATAACGTGAACGACTATAC 4582 Query 3692 TGCTAATATTATTGTTATACCTTATACAAAACAATATGAATTTTGTACTAAAATCAAAGA 3751 | |||||| | ||||| || ||| || |||||||| ||| ||||| || | || Sbjct 4581 AGTTAATATGAAAGTTATTCCATATGCAGAACAATATACATTCTGTACAGAAGTTCGTGA 4522 Query 3752 TATAGATGACAATGTTATTTATTTAAGAGAAGATATGTTTTATAAAGAAA-ACATGGAGC 3810 | | || || || | || ||||||| |||| | | | |||||||||| ||||| | Sbjct 4521 TGTTGAGGATAAAGCTACCTATTTAAAAGAAAACA---TCTATAAAGAAACACATGCAAA 4465 Query 3811 GTTATTATTACAATCCAAGCAATTTAAATTTTGATAACGCTTACTCAAAAAATTACGTTG 3870 | | ||||| || || || ||| ||||||||||||| || |||||| || ||| Sbjct 4464 G-AAATATTATAAACCGTCTAACTTACATTTTGATAACGCCTATTCAAAATCATATATTG 4406 Query 3871 TTGATAAT 3878 || | ||| Sbjct 4405 TTAACAAT 4398 Score = 358 bits (396), Expect = 8e-95 Identities = 515/719 (72%), Gaps = 9/719 (1%) Strand=Plus/Minus Query 5384 TGAATGTGAATACTTTCATGCACGTGATATTATATTTCAAAACTATTTTATTAAAACACA 5443 ||| |||||||| ||| ||| | ||||| ||| |||||||||||||||||||||| Sbjct 2836 TGACTGTGAATATTTTGGTGCTAGGGATATCATACACGAAAACTATTTTATTAAAACACA 2777 Query 5444 AGGTAAGTTAAAAAACAAAATCAACATGACATCACCTTACGACTATCATATTACTGATGA 5503 |||||| | |||| |||||| | ||| | ||||||| |||||| || || || || Sbjct 2776 AGGTAAACTCAAAACCAAAATAGATATGCCTACACCTTATGACTATACAATCACAGACGA 2717 Query 5504 CATCAACGAACACCCTTACTCAAATGATGAGGTTATGTTGTCTAAAGTTGTACTTAACGG 5563 || ||| ||| |||| || |||||||| || |||||||||||||| || Sbjct 2716 GCCAAATGAAACAGTTTATAGTGATGAAGAAGTTATGTTATCAAAAGTTGTACTTAATGG 2657 Query 5564 ATTATATGGCATACCTGCATTACGTTCACATTTTAACTTATTCCGTTTAGATGATAACAA 5623 ||||||||| || ||||| |||||||||| ||||| ||||||||| |||||| || Sbjct 2656 ATTATATGGTATTCCTGCCCTACGTTCACACTTTAATTTATTCCGTAAAGATGAAGACGG 2597 Query 5624 CGAACTATATAATATCATTAACGGTTACAAAAACACTGAACGTAATATATTATTCTCTAC 5683 ||||||| || ||||| ||||||||||| || ||||| ||||||||||||||||| Sbjct 2596 TTTTTTATATAACATGATTAATGGTTACAAAAATACAGAACGAAATATATTATTCTCTAC 2537 Query 5684 ATTTGTCACATCACGTTCATTATATAACTTATTGGTACCTTTCCAATACTTAACTGAAAA 5743 ||||| || |||| ||| | ||||| || | | || || ||| ||||||| |||| Sbjct 2536 CTTTGTTACGTCACAATCACTTTATAATCTACTTGAGCCATTACAAGACTTAACACAAAA 2477 Query 5744 TGAAATTGACGACAATTTTATTTATTGCGATACTGATAGTTTGTATATGAAATCCGTTGT 5803 |||||||||||||| ||||| || || ||||| |||||||| ||| | ||||| | | Sbjct 2476 AGAAATTGACGACAACTTTATATACTGTGATACAGATAGTTTATATCTTAAATCAGCGAT 2417 Query 5804 TAAA-CCCTTATTGA-ACCCCAGTTTATTCGATCCGATAGCCTTAGGTAAATGGGATATT 5861 |||| ||||| | || || ||||| |||||| | |||||||||||||| || Sbjct 2416 TAAAGATAAGATTGACGCTTCAATT--TTCGACCCGATATCGTTAGGTAAATGGGACGTT 2359 Query 5862 GAAAACGAACAGATAGATAAGATGTTTGTACTGAATCATAAAAAATATGCATA---TGAA 5918 || || || | || || || |||| |||| | || ||||| |||||||| || | || Sbjct 2358 GAGAATGACCGTATTGAAAAAATGTATGTATTAAACCATAAGAAATATGCTTACCTTAAA 2299 Query 5919 GTGAATGGAAAGATTAAAATTGCTTCTGCTGGTATACCTAAAAGCGCCTTTGATACA-AG 5977 || ||||| || | | || || ||| | || | ||| ||| | ||| || Sbjct 2298 CCAAACGGAAAAATCCATGTAGCAAGCGCAGGTGTGCCGTTAGACGCGTTTAACACAGAG 2239 Query 5978 CGTCGATTTTGAAACCTTTGTACGTGAACAATTCTTTGACGGTGCGATAATAGAAAACAA 6037 | | || || |||| | | | | || | ||||||| | || | || || Sbjct 2238 CAATCA-TTCGAGGACTTTATTAATAATGACTTTCATCACGGTGCTGTTATCTACAATAA 2180 Query 6038 TAAAAGTATCTATAACGAACAGGGTACGATATCGATTTATCCGTCTAAAACAGAAATTG 6096 ||||||||||||||| |||| ||||| || || || |||||||| ||||| | |||| Sbjct 2179 TAAAAGTATCTATAATAAACAAGGTACCATTTCAATATATCCGTCAGAAACACATATTG 2121 Score = 104 bits (114), Expect = 3e-18 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 7929 AATTTATCTTTAATTTGATCTGGGACTAACACGTCCATTTCTGCACAATTTTCTACGATA 7988 ||||||||||||||||| ||||| | | || | ||||||||| ||||||||| ||| Sbjct 154 AATTTATCTTTAATTTGTTCTGGAAATGGTACATTCATTTCTGCTAAATTTTCTAATATA 95 Query 7989 GATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCATGAGTAAGCCACCTTTTAAT 8048 ||| ||||| |||| || |||||||| || ||| || | ||| |||| ||||| Sbjct 94 CTTAAACCCTCTGTAGCAATGTAATAGAACATGATAACTATTACTAATGCACCGTTTAAG 35 Query 8049 TGTAAAATCTGGTCAATGATGTTAGCTAAAAT 8080 | ||| || | |||||| || |||| || ||| Sbjct 34 TTTAATATGTTGTCAATAATATTAGATATAAT 3 >seq2740 Length=4841 Score = 120 bits (132), Expect = 3e-23 Identities = 203/288 (70%), Gaps = 6/288 (2%) Strand=Plus/Plus Query 7909 TATCATTTTTAATGACTCTTAATTTATCTTTAATTTGATCTGGGACTAACACGTCCATTT 7968 ||||| ||||||| ||| | ||| || ||||| | || ||||| || |||||| Sbjct 1249 TATCACTTTTAATAACTTGAAGTTTTTCAGCAATTTCCTTAGGAACTAATACACCCATTT 1308 Query 7969 CTGCACAATTTTCTACGATAGATAAGCCCTCATTAGCGATATAATAGAAAATCGTAATCA 8028 | || ||||||||||| || ||| || ||||| || | ||||| | | ||||||| Sbjct 1309 CAGCGCAATTTTCTACAATGCTTAATCCTTCATTTGCTAAGTAATAAAGTAATGTAATCA 1368 Query 8029 TGAGTAAGCCACCTTTTAATTGTAAAATCTGGTCAATGATGTTAGCTAAAATGATAATAC 8088 | | | ||||| |||| | | || || || || || ||||||||||| ||||||| Sbjct 1369 TTAACAGTCCACCATTTAGCTCAAGTATTTGATCTATAATATTAGCTAAAATAATAATAC 1428 Query 8089 AGAATATCAATAattttttagcaaaacctttcattgattttttagaccatagattattat 8148 | ||||||| | |||| | || ||||| ||| ||||| | |||| || ||| Sbjct 1429 A-AATATCATCATTTTTCTCGC-AAACCAAACATGGATTTACGACTCCAT--ATGATTTG 1484 Query 8149 ttttaattgctttagCAAAACCAGTAACAACATCTACAATCATCAAAA 8196 |||||| |||||| || | |||||||| | ||||| | ||| |||| Sbjct 1485 TTTTAAATGCTTTTGC-CATCCAGTAAC-ATATCTAAATCCATTAAAA 1530 >seq1498 Length=16070 Score = 89.7 bits (98), Expect = 6e-14 Identities = 138/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 6772 ACCATGTAATTGTGACATATACGCCCATGTTAATTCTGTACACTGA--CCTGCATTACCC 6829 ||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||| | | Sbjct 4770 ACCATGTAATTGTGACATATAAGCCCATGTTAACTCTGTACACTGACCCCTCAATTTCTC 4711 Query 6830 GTTTGAGGAAATATGTTACCTGGTTTGTATAAATATTCTTTTTTGAATAAAGGTACACCA 6889 || | ||| | || || ||||| | ||||| ||| | ||| |||| || Sbjct 4710 ATT--ATCAAACACATTTCCGGGTTTATCCAAATAAGCTTCATCAAATTTAGGTGCAGTT 4653 Query 6890 ATTGCTTTTTTATATTTTTCTGGTAACTGTGCGTATGTCCAGTTACCACCAATGACGCGA 6949 || ||||||||| |||||||| | || ||||| ||| || |||| || | Sbjct 4652 ATATATTTTTTATACTTTTCTGGAACCTTATCGTATTCCCAATTTTTTTCAATAACTTTA 4593 Query 6950 CCACTTTTACCATTA 6964 || | ||||||||| Sbjct 4592 CCTTTCTTACCATTA 4578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 56317216499100