Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_031924.1
Length=47564
Score E
Sequences producing significant alignments: (Bits) Value
seq1617 95.1 4e-15
>seq1617
Length=11810
Score = 95.1 bits (104), Expect = 4e-15
Identities = 177/256 (69%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 28946 GACATGGAGTCTGACGTGGGTTTTCACGCTGGCGGAGGAGCGTGCATTTATCCAGTGGTT 29005
||||||| ||| || ||| | |||||||||||| ||||||| || || |||||| |
Sbjct 1415 GACATGGTCTCTCACATGGATATTCACGCTGGCGCAGGAGCGGGC-TTCCAACAGTGGCT 1357
Query 29006 GCGTAGTCCTAACTACCTCAACAAATGCAACAACTGGTTCACCATGATGATTGATCTCGG 29065
||| || ||||||||||| || | |||||||| ||||| | | || | ||
Sbjct 1356 GCGCAGCCCTAACTACCTTAATCGCGGACTGAACTGGTTTCGCATGAGGGTGGACATAGG 1297
Query 29066 AGGCAGC-GGCTTACAGGAGCAGACGCTGCATTTTACCGATTATCCGGTGCAGACCAGTA 29124
|| ||| || ||| |||| ||| ||||| || | ||||| |||||||| |
Sbjct 1296 -GGGAGCTGGTCCTCAGTTGCAGGAGCTCCATTTCACTCAGATGCCGGTACAGACCAGCA 1238
Query 29125 TTGATGGTGGCGTGGTCACGTGGACTGGCAATGTTATCGCCAAGAAACTCAATAACACTA 29184
| || || ||||| || || ||||| || | || ||||| || | || ||||| |
Sbjct 1237 TAGACGGCGGCGTTGTTACCTGGACGGGTACCGTCATCGCGAACAGGCTAAATAATGCCG 1178
Query 29185 TGGATGAGTTTGATGA 29200
||||| ||||||||
Sbjct 1177 ATGATGATTTTGATGA 1162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152039991737100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |