Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_000929.1 Length=36717 Score E Sequences producing significant alignments: (Bits) Value seq265 87.8 4e-13 >seq265 Length=448903 Score = 87.8 bits (96), Expect = 4e-13 Identities = 180/268 (67%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 13360 GGCGCTGTCAAGCCGCCCGTCTAACCTGCGTGGTTTGCAGGGGGACGTGGTGATTGATGA 13419 ||||||||| || || || || |||||||||||| ||||| | | || |||||||| Sbjct 60629 GGCGCTGTCCAGTCGGCCTTCCAACCTGCGTGGTCGTCAGGGCATCATCGTTATTGATGA 60570 Query 13420 GGCGGCATTCCATGAAGCCCTGGACGAACTCCTGAAAGCGGCCTTTGCACTAAACATGTG 13479 || || ||||||||| ||| || || ||||| || || | || | || || Sbjct 60569 AGCCGCGTTCCATGAACAGTTGGGGGAGCTACTGAAGGCCGCGCTGGCGATGCTGATTTG 60510 Query 13480 GGGTGCCAGCGTGCGCATCATATCGACACATAACGGCGTCGATAATTTGTTTAATCAGTA 13539 ||| | || |||||| |||| || || ||||| || ||||| || ||| ||| || Sbjct 60509 GGGCGGCAAGGTGCGCGTCATCTCCACCCATAATGGTGTCGAAAACCCGTTCAATGTGTT 60450 Query 13540 CATTCAGGATGCGCGCGAGGGGCGCAAGGATTACAGCGTTCACCGCATCACGCTGGATGA 13599 | | ||| |||| || ||| || |||||| || |||||| | | || || Sbjct 60449 GCTGAATGATATCCGCGCAGGACGCCGTGACGGCAGCGTGCATCGCATCCCCTTTGAGGA 60390 Query 13600 TGCCATCGCTGACGGGTTATACCGACGT 13627 || | || || ||||| | ||| ||| Sbjct 60389 GGCGGTGGCCGAGGGGTTGTTCCGCCGT 60362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117366169683886