Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq251 86.0 5e-12 >seq251 Length=2698768 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| || |||| || || ||||| ||| ||| || || || Sbjct 663631 ATGCAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACCTTGGAAGTCGAGCCATCA 663690 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || ||||| ||||| ||||| |||||| | || |||||| Sbjct 663691 GACACCATCGAAAATGTTAAGGCTAAAATCCAAGATAAGGAAGGTATCCCTCCAGATCAG 663750 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | | ||||| || || || |||||||||||| | ||| || | || |||||| Sbjct 663751 CAGCGTTTGATCTTCGCCGGTAAGCAACTGGAAGATGGCCGCACTCTGTCGGACTACAAT 663810 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||||||| |||||||| |||| | || | || ||||| Sbjct 663811 ATCCAGAAGGAAAGCACTCTTCATCTGGTTCTGCGTCTTCGTGGAGG 663857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428311166818835