Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4651 147 3e-30 >seq4651 Length=474197 Score = 147 bits (162), Expect = 3e-30 Identities = 234/332 (70%), Gaps = 4/332 (1%) Strand=Plus/Plus Query 145688 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTGGATGAAGTCCCCGGGC 145746 |||| | |||||| ||||||| ||| ||| || | || | | ||| || || ||| Sbjct 349690 GCTCGAGGTGGTTCAGGTAGAGGTGGCAGTCGCCGCCGGTCCAC-ACGAAATCGCCCGGC 349748 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 || ||| | ||||| ||||| || | || | ||||||||| ||||||||| Sbjct 349749 GCGTAGCCGCACACCTGGGCCACCATCATCGTGAAGAGCGCGTAGCTGGCGATGTTGAAG 349808 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866 || || ||||| ||||| | |||||| || |||||||| || |||| ||| | Sbjct 349809 GGAACGCCCAGGAAGATGTCGGCGCTGCGCTGATAGAGCTGGCACGACAGCTTGCCGTCG 349868 Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926 ||||||||||||||| |||| |||||||||||||||||||||| | || ||| ||| Sbjct 349869 GCCACGTAGAACTGGAACAGCGCGTGGCAGGGCGGCAGGGCCATGCGGTCCACGTCGGCC 349928 Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATC 145986 ||||||||||| | | || | | | | | || |||||| |||||| | || | || Sbjct 349929 GGGTTCCAGGCCGACACGATGTGGCGGCGGGAGTCCGGGTTCTTCTTGAGCGCCTCGATG 349988 Query 145987 AGGTCCCTGAGCTGGTCCACGCCCTGCCCCCG 146018 || | | || |||||| | | |||| |||| Sbjct 349989 AGCTGGCCGATCTGGTCGATG--CTGCGCCCG 350018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590041712558280