Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq73 127 1e-24 >seq73 Length=471406 Score = 127 bits (140), Expect = 1e-24 Identities = 234/341 (69%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 || || ||||| |||||| ||| | || || ||| ||||| || || || || || || Sbjct 407928 GTAACGTGGGCCATCATATGAGTCAGTAAAGCATAACTAGCGATATTGAATGGGACTCCG 407987 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || |||||||||||||||| ||||||||||||||| ||||| | ||||| ||| || Sbjct 407988 AGGCCCATATCAGCTGATCGTTGATATAACTGACACGAAAGTTCTCCATTTGCCACGAAA 408047 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 || || ||| ||| || || || | ||||||| ||| | ||||| ||||| Sbjct 408048 AATTGCGCCAAGCAATGGCAAGGAGGAAGGGCCATTTGTGGGATATCTATCGGGTTCCAT 408107 Query 97297 GCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA--TCTGCT 97354 |||| ||| | || | || ||| ||||| || || | ||| ||| || | ||||| Sbjct 408108 GCACTCATGATAATACGTCGATCCGTTGGATTGGTCTTAATGCGATTTATCACTTCTGC- 408166 Query 97355 TTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAA 97414 ||| || || | || | || || | | || || ||||| || |||| Sbjct 408167 -TAACTGGTCGATACCCTGCCCTGTGTAGTCATCATTGCATGTTTTATATTTGGCGCCAA 408225 Query 97415 AATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 |||| | |||||||||||| || || || || || || ||| Sbjct 408226 AATGACGCCATTGGAATCCGTATACCGGGCCTAGATCACCT 408266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346763894872490