Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq73 104 4e-17 >seq73 Length=471406 Score = 104 bits (114), Expect = 4e-17 Identities = 231/341 (68%), Gaps = 13/341 (4%) Strand=Plus/Plus Query 205450 TGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCC 205509 || || ||||||| ||||| |||| ||||||||| | ||| ||||| || || | ||| Sbjct 407934 TGGGCCATCATATGAGTCAGTAAAGCATAACTAGCGATATTGAATGGGACTCCGAGGCCC 407993 Query 205510 ATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTATTAATTACATG--AA 205567 ||||||||||||| |||||| | ||||| | ||| | | ||| | || | || Sbjct 407994 ATATCAGCTGATCGTTGATATAACTGACACGAAAGTTCTCCATT-----TGCCACGAAAA 408048 Query 205568 ATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGG 205627 |||| | || ||||| ||||| || | |||| | | | |||||| || ||||| | Sbjct 408049 ATTGCGCCAAGCAATGGCAAGGAGGAAGGGCCATTTGTGGGATATCTATCGGGTTCCATG 408108 Query 205628 CTGTTAATATTATATTTCTAGATTC--AGGtttattttttattttatttatAATATGTGT 205685 | | | || ||| || ||| | || || | || || |||||| | | || Sbjct 408109 CACTCATGATAATACGTC--GATCCGTTGGATTGGTCTTAATGCGATTTATCACTTCTGC 408166 Query 205686 TAATTGATCAAATCCTTGATTTGTATAAT-TTGTATCCATATCAATATATTTAGCACCAA 205744 ||| || || | || || ||| || | | | ||| | ||||||| || |||| Sbjct 408167 TAACTGGTCGATACCCTGCCCTGTGTAGTCATCATTGCATGT-TTTATATTTGGCGCCAA 408225 Query 205745 AATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCT 205785 ||||||||||||| || || || || || |||| ||||||| Sbjct 408226 AATGACGCCATTGGAATCCGTATACCGGGCCTAGATCACCT 408266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755411078697600