Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq130 109 1e-18 >seq130 Length=3389925 Score = 109 bits (120), Expect = 1e-18 Identities = 254/374 (68%), Gaps = 13/374 (3%) Strand=Plus/Plus Query 189281 ATTGTAAGAAGAGAACTATCGGATAATTTTTGTTACTATAACAAACATTATGATAGTATC 189340 ||||| ||||||| || || ||||| |||||||| || |||||| | || || | | | Sbjct 1199174 ATTGTTCGAAGAGAGCTGTCCGATAACTTTTGTTATTACAACAAAAACTACGACAATTTG 1199233 Query 189341 CA----GTCTACTCATTCATGGGCCAGAAAAACATTAGAAGATCACATTAATGATCCTAG 189396 | | ||| ||| || |||||||| |||| || || || || ||| | Sbjct 1199234 AAAGGAGCATACG-ATTG--GGCCCAGAAAA-CATTGGATGACCATCGCAAGGATAAACG 1199289 Query 189397 AAAGTATATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAA 189456 || ||| | || || | || | || |||| ||||||||| | | ||||| Sbjct 1199290 AACCTATGTCTACAGCAGGGACCAGTTGGAGCAAGCTCGAACTCATGACGATTTGTGGAA 1199349 Query 189457 CGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTG 189516 | | ||||||| |||||||| | ||||| |||||||| | ||||| ||||||||||| Sbjct 1199350 CTCTGCACAAATTCAGATGGTCAAGGAAGGTAAAATGCACGGCTTTTTGCGAATGTATTG 1199409 Query 189517 GGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCT-TTGAGTTATAG-TATC 189574 ||| |||||||| | || ||||| | ||| || || || ||| |||| | | || Sbjct 1199410 GGCAAAGAAGATTTTGGAGTGGACCAAAACTCCGGAGGAAGCTCTTGA--AACGGCAATT 1199467 Query 189575 TATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTTGTATG 189634 || ||||| | ||| | | |||||| || || || || ||||| || || ||| Sbjct 1199468 TACCTGAACGATCGCTACCAGTTGGACGGCCGTGACCCGAATGGTTACGTTGGCTGCATG 1199527 Query 189635 TGGTCTATTTGCGG 189648 ||||| | |||||| Sbjct 1199528 TGGTCCA-TTGCGG 1199540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923141904410280