Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq73 134 1e-26 >seq73 Length=471406 Score = 134 bits (148), Expect = 1e-26 Identities = 238/342 (70%), Gaps = 4/342 (1%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||| | || || || || ||||| |||||| | |||||||| || ||||| || Sbjct 408265 GGTGATCTAGGCCCGGTATACGGATTCCAATGGCGTCATTTTGGCGCCAAATATAAA-AC 408207 Query 20278 ATGAACACAA-ATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 ||| | | | || || || || | || || ||| | | || || ||| || Sbjct 408206 ATGCAATGATGACTACACAGGGCAGGGTATCGACCAGTTAGCAGAAGTGATAAATCGCAT 408147 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 ||| || || |||| || || | ||||| | | || |||||| | | |||| | || Sbjct 408146 TAAGACCAATCCAACGGATCGACGTATTATCATGAGTGCATGGAACCCGATAGATATCCC 408087 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAAT 20455 |||||| | ||||| || ||| |||| || ||||||| ||| || ||| ||| Sbjct 408086 ACAAATGGCCCTTCCTCCTTGCCAT-TGCTTGGCGCAATTTTTCGTGGCAAATGGAGAAC 408028 Query 20456 TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTG 20515 | |||||||| | ||||||||||| ||||||||||| || || || || |||||||| | Sbjct 408027 TTTCGTGTCAGTTATATCAACGATCAGCTGATATGGGCCTCGGAGTCCCATTCAATATCG 407968 Query 20516 CAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 | |||||||| | || || ||||||| || || ||||||| Sbjct 407967 CTAGTTATGCTTTACTGACTCATATGATGGCCCACGTTACAG 407926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399160856933365