Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_002794.1 Length=195859 Score E Sequences producing significant alignments: (Bits) Value seq3013 87.8 2e-12 >seq3013 Length=6250 Score = 87.8 bits (96), Expect = 2e-12 Identities = 103/138 (75%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 175236 GCGCACCAGTTCCTTGAAGATGTTGCGGAGCGACGGCGGGATCCGGTCGCCCGTCGTCGC 175295 |||| ||| ||||||||||||||||| ||||||||||| | | | |||| | || | Sbjct 5794 GCGCTGCAGCTCCTTGAAGATGTTGCGCAGCGACGGCGGCAGCTGCACGCCGGGCGCGAC 5735 Query 175296 G---AACGCCAGTCCGTTGGC---GCTGCCGTCGTGATAGGGATCCTGCCCGATGATGAC 175349 | |||||||| || | ||| || || | |||| || || |||||||| | |||||| Sbjct 5734 GGAAAACGCCAGCCCCTCGGCCTGGCCGCGGCCGTGGTACGGGTCCTGCCCCAGGATGAC 5675 Query 175350 CACGTGCACGTCTTCGGG 175367 |||| ||||| ||||| Sbjct 5674 CACGCGCACGCTCTCGGG 5657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626583539560680