Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq986 120 2e-22 seq4622 116 3e-21 seq251 113 4e-20 >seq986 Length=4314454 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||| ||||||||||| ||| || ||| | || || Sbjct 1409152 ACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCGGATAGAGTACGACCATCTTCT 1409093 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| |||||||| |||| |||||||| || ||||| | ||| ||||||||| Sbjct 1409092 AGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCCTTGTCCTGG 1409033 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | ||||| | ||| ||||||| || || |||||| Sbjct 1409032 ATCTTGGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACCTCCAGAGTGATGGTCTTG 1408973 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||||| ||||| ||||| Sbjct 1408972 CCAGTCAAGGTCTTCACGAAGATCTGCAT 1408944 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| ||||||||||| ||| || |||| || || || || || ||||| Sbjct 1407766 TCCTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAA 1407707 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||||| || ||||| | ||| ||||||||| ||||| ||| || Sbjct 1407706 ATCAGACGTTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTGGCCTTCACGTTT 1407647 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | ||||| | ||| ||||||| || || |||||||| ||||| |||||||| Sbjct 1407646 TCGATGGTGTCCGAAGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACG 1407587 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 1407586 AAGATCTGCAT 1407576 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| ||||||||||| ||| ||| | || || || || || ||||| || Sbjct 1407538 TCCTTCTGGATGTTGTAGTCTGACAGAGTACGACCATCCTCGAGCTGCTTACCGGCAAAG 1407479 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| |||||||| || ||||| | || ||||||||| || || |||||| Sbjct 1407478 ATCAGACGCTGTTGATCTGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTT 1407419 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | ||||| | ||| ||||||| || || |||||||| |||| |||||||| Sbjct 1407418 TCGATTGTGTCCGAAGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACG 1407359 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 1407358 AAGATCTGCAT 1407348 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || ||||| ||||||||||| ||| || |||| || || || || || ||||| Sbjct 1408222 TCTTTCTGGATGTTGTAGTCTGACAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAG 1408163 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||||| || ||||| | ||| ||||||||| ||||| ||| || Sbjct 1408162 ATCAGACGTTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTGGCCTTCACGTTT 1408103 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||| ||||||| || || |||||||| ||||| ||||||||| Sbjct 1408102 TCGATGGTGTCGGAAGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACA 1408043 Query 45326 AAGATTTGCAT 45336 || || ||||| Sbjct 1408042 AAAATCTGCAT 1408032 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| ||||||||||| ||| || |||| || || ||||| || ||||| Sbjct 1408450 TCCTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCCTCGAGCTGTTTACCAGCGAAG 1408391 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||||| || ||||| | ||| ||||||||| || || || || | Sbjct 1408390 ATCAGACGTTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTTGGCTTTCACGTTC 1408331 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||| ||||||| || || ||||| || || |||||||||||| Sbjct 1408330 TCGATGGTGTCTGAAGGCTCGACCTCCAAAGTGATGGTCTTACCAGTAAGAGTCTTCACA 1408271 Query 45326 AAGATTTGCAT 45336 || || ||||| Sbjct 1408270 AAAATCTGCAT 1408260 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| ||||||||||| ||| || |||| || || ||||| || ||||| Sbjct 1408906 TCCTTCTGGATGTTGTAGTCAGACAGAGTACGGCCGTCCTCGAGCTGTTTACCAGCGAAG 1408847 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||||| || ||||| | ||| ||||||||| || || || || | Sbjct 1408846 ATCAGACGTTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTTGGCTTTCACGTTC 1408787 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||| ||||||| || || ||||| || || |||||||||||| Sbjct 1408786 TCGATGGTGTCTGAAGGCTCGACCTCCAAAGTGATGGTCTTACCAGTAAGAGTCTTCACA 1408727 Query 45326 AAGATTTGCAT 45336 || || ||||| Sbjct 1408726 AAAATCTGCAT 1408716 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || ||||| ||||||||||| ||| ||| | || || || || || ||||| || Sbjct 1408678 TCTTTCTGGATGTTGTAGTCTGACAGAGTACGACCATCCTCGAGCTGCTTACCGGCAAAG 1408619 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| ||||| || || || || | || ||||||||| || || |||||| | Sbjct 1408618 ATCAGACGCTGCTGATCTGGTGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTC 1408559 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | ||||| | ||| ||||||| || || |||||||| |||| |||||||| Sbjct 1408558 TCGATGGTGTCCGAAGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACG 1408499 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 1408498 AAGATCTGCAT 1408488 >seq4622 Length=411747 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||||||| ||| ||| | || ||| Sbjct 274383 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCC 274442 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| ||||| ||||| || || || || | |||||||||||| Sbjct 274443 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 274502 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | | || || ||||| | ||| || |||||| Sbjct 274503 ATTTTGGCCTTGACATTCTCGATCGTATCGGACGGTTCGACCTCAAGGGTGATGGTCTTG 274562 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| ||||| || ||||| ||||| Sbjct 274563 CCCGTCAGGGTCTTAACGAAGATCTGCAT 274591 >seq251 Length=2698768 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||||||||| | ||||| ||||| ||||| || |||||||||||||||||| Sbjct 664769 CCGCCTCTCAATCGCAGGACCAAATGCAGTGTGCTTTCTTTCTGAATGTTGTAGTCGGAA 664710 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | || ||||| || || |||||||| ||||| ||||| || || ||||| Sbjct 664709 AGGGTACGGCCATCTTCCAGCTGCTTACCGGCGAAGATCAATCGCTGCTGATCTGGAGGG 664650 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||| || || || ||| || | | | |||| ||| || Sbjct 664649 ATTCCTTCCTTATCTTGGATCTTAGCCTTTACATTCTCGATAGTGTCGGATGGCTCAACT 664590 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || ||||| || ||||||||||| || ||||| ||||| Sbjct 664589 TCCAGGGTGATGGTCTTACCGGTCAGAGTCTTGACGAAGATCTGCAT 664543 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||||| |||||||| || |||||||| ||| ||| | || ||| Sbjct 663839 ACCAGATGAAGAGTGCTTTCCTTCTGGATATTGTAGTCCGACAGAGTGCGGCCATCTTCC 663780 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || |||||||| ||||| ||||| || || ||||| | ||| ||||| || Sbjct 663779 AGTTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATACCTTCCTTATCTTGG 663720 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| |||||| | | | |||| ||| || |||| ||| || ||||| Sbjct 663719 ATTTTAGCCTTAACATTTTCGATGGTGTCTGATGGCTCGACTTCCAAGGTGATGGTCTTT 663660 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||||| || ||||| ||||| Sbjct 663659 CCAGTCAGAGTCTTGACGAAGATCTGCAT 663631 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGT-GCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||||||| ||||| | || ||||||| | |||||| ||| ||| || | || || Sbjct 659751 ACCAAGTGTAGCGTAGATC-CCTTCTGGACGTTGTAATCGGACAGGGCACGGCCATCTTC 659693 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 ||| ||||| || ||||| |||| |||||||| || ||||| | ||| ||||| ||| | Sbjct 659692 CAGCTGTTTGCCAGCGAAGATCAGGCGCTGTTGATCTGGAGGGATACCTTCCTTATCCTC 659633 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| | | | | |||| | | || || |||| ||| || || || Sbjct 659632 GATCTTGCCCTTGATGTTCTGGATGGTGTCTACGGCTTCAACATCCAAGGTGATGGTTTT 659573 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || |||||||||||||| ||||| ||||| ||| Sbjct 659572 ACCGGTCAGAGTCTTCACGAAGATCTGCATATTG 659539 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||| ||||| |||||||| || |||||||| ||| ||| | || ||| Sbjct 664523 ACCAGATGCAGAGTGCTTTCCTTCTGGATATTGTAGTCCGACAGAGTGCGGCCATCCTCC 664464 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| ||||| || ||||| ||||| || || ||||| | ||| ||||| ||| Sbjct 664463 AGCTGTTTACCGGCAAAGATCAAACGCTGCTGATCTGGAGGGATACCTTCCTTATCCTGG 664404 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| || || | || || ||||| Sbjct 664403 ATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCAACTTCAAGAGTGATGGTCTTT 664344 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||||| || ||||| ||||| Sbjct 664343 CCAGTCAGAGTCTTGACGAAGATCTGCAT 664315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395052295144897