Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq73 145 2e-29 seq4284 111 3e-19 >seq73 Length=471406 Score = 145 bits (160), Expect = 2e-29 Identities = 237/334 (71%), Gaps = 8/334 (2%) Strand=Plus/Minus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || ||| | || || ||||||||||||||||||||||||||||| || ||||| | || Sbjct 408265 GGTGATCTAGGCCCGGTATACGGATTCCAATGGCGTCATTTTGGCGCCAAATATAAAACA 408206 Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515 || | || || || || ||||||| || || || || | | |||| | | Sbjct 408205 TGCAATGATGACTACACAGGGCAGGGTATCGACCAGTTAGCAGAAGTGATAAATCGCATT 408146 Query 35516 AGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCA 35574 | ||| |||||| ||| || | || || |||| |||||||| || || ||| | | Sbjct 408145 A-AGACCAATCCAACGGATCGACGTATTATCATGAGTGCATGGAACCCGATAGATATCCC 408087 Query 35575 CCTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAAT 35633 | ||||| |||||||| ||||| || | || ||||||| ||||| ||||||||| Sbjct 408086 ACAAATGGCCCTTCCTCCTTGCCA-TTGCTTGGCGCAATTTTTCGTGGCAAATGGAGAAC 408028 Query 35634 TGTCGTGCCAGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATAT 35691 | ||||| ||||| ||||| ||| ||| || ||| || | || || || |||||||| Sbjct 408027 TTTCGTGTCAGTTATATCAACGATCAGCTGATATG--GGCCTCGGAGTCCCATTCAATAT 407970 Query 35692 TGCATCATACTCTCTTCTGACTCATCTGATGGCC 35725 || || || | ||||||||| |||||||| Sbjct 407969 CGCTAGTTATGCTTTACTGACTCATATGATGGCC 407936 >seq4284 Length=891408 Score = 111 bits (122), Expect = 3e-19 Identities = 257/386 (67%), Gaps = 6/386 (2%) Strand=Plus/Plus Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACG---ATTTGGCGGAA 101911 |||||||| | | ||||| | || ||||| |||||| || | | || | ||| Sbjct 85157 AAGAAGAAAGCTGACTGGGCATTGAACTGGATTTCAAGCAAAAAGGCCAACTTCGGAGAA 85216 Query 101912 CTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATT 101971 | | || ||||| || || || ||||| || ||||||||||| ||||||||||| Sbjct 85217 CGCGTCGTAGCCTTCGCCGCCGTGGAAGGTATTTTCTTTAGTGGAAGTTTCGCATCCATC 85276 Query 101972 TTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCT 102031 || ||| | ||||| | || | ||||||| || || | |||||| || || || || Sbjct 85277 TTTTGGTTGAAGAAGCGTGGACTGATGCCTGGGCTAACATTCTCCAACGAATTGATCTCA 85336 Query 102032 AGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGAT 102091 | |||||||| || || |||||||| || | |||| ||| | | | || | Sbjct 85337 CGTGACGAAGGCCTGCACACGGACTTTGCTTGTCTTATGTTCAAATA---TCTGGTACAG 85393 Query 102092 ACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151 | |||||| |||| | | | || ||| || ||||| |||| || ||||| || Sbjct 85394 AAACCATCACAAGAACGTGTGATCGAGATTATCCGCGAAGCAGTCCTGATCGAACAGGAG 85453 Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211 || || || |||| || ||| | | | || ||||| || | | ||| ||| Sbjct 85454 TTCCTGACGAAAGCCCTTCCGGTTGACCTGCTTGGCATGAATTGTGACCTTATGTCGCAG 85513 Query 102212 TACATTGAATTTGTGGCAGATAAACT 102237 || |||||||| ||||| |||| ||| Sbjct 85514 TATATTGAATTCGTGGCTGATAGACT 85539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989523685782935