Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq1577 80.6 5e-11 >seq1577 Length=12883 Score = 80.6 bits (88), Expect = 5e-11 Identities = 72/88 (82%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 347 TTGAATATTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCG 406 |||||| | |||||| || ||||| ||| | ||||| ||||||| |||||| ||||| Sbjct 7706 TTGAAT-TCATTGGTAGGGCGTGAGGGACTTGAACCCGCGACCAAAGGATTATGAGTCCT 7648 Query 407 CTGCTCTA-CCGACTGAGCTAACGACCC 433 |||||||| || |||||||||||| ||| Sbjct 7647 CTGCTCTAACCAACTGAGCTAACGCCCC 7620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100698311293980