Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq4284 98.7 1e-15 >seq4284 Length=891408 Score = 98.7 bits (108), Expect = 1e-15 Identities = 178/256 (70%), Gaps = 6/256 (2%) Strand=Plus/Minus Query 14141 AATGTATGTATCAATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCT 14199 |||||| ||||||||||| ||| | ||||||||| ||| | |||||||| || || | Sbjct 84834 AATGTAAGTATCAATAAG-CAGCGAGTACATTTCACTGTGGACATTTTCCATTGCAATTT 84776 Query 14200 GAAAACCATAAAAGCATCTAGCTTC--CGACCATTGTACTTCCGAGTAAAATCTTTCGGC 14257 |||| || || ||||| | ||||| |||| || || ||| | || | ||| | Sbjct 84775 GAAATCCGTAGAAGCAACGCGCTTCGGTGACC--TGGACCTCCTGGCTGAAACGTTCCAC 84718 Query 14258 CAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAA 14317 | || || || || || ||||| ||| ||||| || |||| | | | || || Sbjct 84717 AAGGTTCTCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCCAGCACATGTGAGATGAA 84658 Query 14318 GTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTC 14377 || | ||| | ||||| |||| |||||||| | ||| ||||| ||||| ||||| Sbjct 84657 GTGCTTCTCGCCGGACTTGAGCTTTTCCCAATCGGCCAGATCTTTAGAGAGATCGACTTC 84598 Query 14378 ATCAACTGTCCAAAAA 14393 || |||||||| ||| Sbjct 84597 CTCTACTGTCCAGAAA 84582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479699474173800