Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq986 91.5 1e-13 >seq986 Length=4314454 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || || ||||| |||||||||||| |||| | | | |||||| Sbjct 1409152 ACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCGGATAGAGTACGACCATCTTCT 1409093 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||| || ||| | |||| ||| ||||| || ||||| ||||| ||||| Sbjct 1409092 AGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCCTTGTCCTGG 1409033 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| || | || ||||| || | || || || | || ||||| || Sbjct 1409032 ATCTTGGCCTTGACGTTCTCGATGGTGTCCGAAGGCTCGACCTCCAGAGTGATGGTCTTG 1408973 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| || || || || || |||||| Sbjct 1408972 CCAGTCAAGGTCTTCACGAAGATCTGCATA 1408943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362158202321337