Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq743 86.0 2e-12 >seq743 Length=85660 Score = 86.0 bits (94), Expect = 2e-12 Identities = 128/180 (71%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 27940 CACGACCTGCGCCGAACAGCCAGCACGCTGTTACATGAGGCAGGGTATCCATCA--GACT 27997 || ||| |||| || |||| ||||||| || | |||||||| || || || || |||| Sbjct 13584 CATGACTTGCGGCGCACAGGCAGCACGTTGCTGCATGAGGCCGGCTA--CAACACGGACT 13527 Query 27998 GGATTGAAAAGGCGCTGGCGCATGAACAGAAGGGAGTGCGAGCGGTATACAACAAAGCGG 28057 ||||||| ||| |||||||| || ||| || || | || || |||||||| || | Sbjct 13526 GGATTGAGAAGTGCCTGGCGCACGAGCAGCGAGGCGTCAGGGCCGTCTACAACAAGGCCG 13467 Query 28058 AGTATGCCAGGCAGCGCGCCTACATGTTGCAGCAGTGGGCGGATATGGTTGATGCCTGGA 28117 |||| | |||||| | |||||||| | |||||||| ||| | || | |||| Sbjct 13466 AGTACCGCGAGCAGCGGACGGCGATGTTGCAAGACTGGGCGGACATGATCGACGAATGGA 13407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126818435701122