Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq2015 152 2e-32 seq810 129 2e-25 >seq2015 Length=8975 Score = 152 bits (168), Expect = 2e-32 Identities = 657/1019 (64%), Gaps = 51/1019 (5%) Strand=Plus/Minus Query 44147 CCTTTTAACATCCGGATGGTCCGGGAGACGGCGGACAGCACCT-CGGACCAGCTGCAGAA 44205 || ||||| ||| || |||| || | || | ||||||||| | | || | |||| Sbjct 8503 CCGTTTAATATCAGGGTGGTACGTAACACTCCAGACAGCACCAGCAGTAAAGTCG-AGAA 8445 Query 44206 TAAGACGCTCTGGTCGTCATACACCGAAATCATCGATGTGAAACAGTGCTACCCGAACAC 44265 ||| || || ||||| || |||||||||||||| |||| ||||||| || || Sbjct 8444 TAAAACCCTGTGGTCCAGCTATACCGAAATCATCGACAGCAAACTCAGCTACCCAAATAC 8385 Query 44266 GGCGATTGTGGGGCTGCAGGTGGATGCGGAGCAGTTTGGTGGCCAGCAGATGACGGTGAA 44325 ||| | || ||||| | || | ||||||| || || | | || || Sbjct 8384 CGCGCTGGTAGGGCTCTCTTTTGACTCTTCGCAGTTTCAGGGGGTGCCAAAGC--GT-AA 8328 Query 44326 CTACCATATCCGCGGTCGCATCATTCAGGTACCGTCAAACTATGACCCGGAAAAACGCAC 44385 ||| | || ||||| | || || | || || |||||| ||||||| ||||| Sbjct 8327 CTATCTGATTCGCGGCCTGATGATCAAAGTCCCCAGCAACTATACGCCGGAAACCCGCAC 8268 Query 44386 TTACAGCGGTATCTGGGACGGCAGCCTGAAACCGGCATACAGCAATAACCCGGCCTGGTG 44445 |||||| || || ||||| |||||| | || || | || ||||||||||| ||| Sbjct 8267 TTACAGTGGGATGTGGGATGGCAGCTTCAAGATTGCCTGGAGTAATAACCCGGCGTGGAT 8208 Query 44446 CCTGTGGGACATGCTGACCCACCCGCGCTACGGAATGGGAAAACGTCTGGGG-GCGGCGG 44504 | | | || || ||| || ||| || || | || ||||| |||||| | || Sbjct 8207 CTTCTACGATCTGGTGATGAACGAGCGTTATGGCCTAGGGAAACGCCTGGGGAGTTTTGG 8148 Query 44505 ATGTGGACAAGTGGGCGCTGTATGCCATCGGGCAGTACTGCGACCAGACGGTCCCGGATG 44564 ||| ||||||||||| ||||| ||| | ||| || ||||| || |||| || | Sbjct 8147 CTGT-GACAAGTGGGCCATGTATAGCATTGCGCAATATTGCGATGTGATGGTCGACGACG 8089 Query 44565 GTTTCGGGGGCACAGAGCCGCGGATGACCTTTAA-TGCGTACCTGTCAC--AACAGCGTA 44621 | ||||| || ||| ||||| ||||| | ||| ||| || | |||| | | ||| Sbjct 8088 GCTTCGGTAACAAAGAACCGCGTATGACTTGTAACTGC-TA--TATCACCGATCGTCGTC 8032 Query 44622 AGGCGTGGGACGTTCTCAGTGATTTCTGCTCGGCGATGCGCTGT---ATGCCGGTATGGA 44678 |||||| || || | | || |||| || |||| | || ||||| || ||| Sbjct 8031 AGGCGTATGAGGTGGTGAACGA--TCTG-GCGTCGATCTTCCGTGCCATGCCAGTGTGGG 7975 Query 44679 ACGG---GCAGACGCTGACGTTTGTGCAGGACCGTCCGTCAGATGTGGTGTGGCCCTACA 44735 | || ||||| ||| | ||||||||| || || ||| ||| |||| || | Sbjct 7974 ATGGCATGCAGA---TGAGCTGTGTGCAGGATCGGCCCAGCGATCCGGTCTGGCGTTATA 7918 Query 44736 CAAACAGTGATGTGGTGGCTGACAATGAAGGTGTGGGATTCCGCTACAGTTTCAGCGCCC 44795 | ||| | ||||||| || || | ||| | || | |||||||| Sbjct 7917 CCAACGCCAACGTGGTGGATGGCA------------GTTTCAGTTATCAATCCAGCGCCC 7870 Query 44796 TGAAGGACCGTCATACTGCGGTGGAGGTCAGTTACGTCGA-CCCGCATAACGGCTGGCAG 44854 ||||| || ||||| |||| | | || | || ||||| ||||| || |||||| || Sbjct 7869 AGAAGGCACGGCATACGGCGGCGCATGTGCGCTATGTCGATCCCGC-CAATGGCTGGAAG 7811 Query 44855 ACCTCCACGGAACTGGTGGAAGACCCGGAAGCCAT-ACTG--CGCTACGGACGCAACCTG 44911 ||| | |||||| || ||| || | || | || || ||||| | |||| | Sbjct 7810 ACCGCGACGGAATACGTTTCTGAC---GATGTGATGATTGCCCGTTACGGTCTCAACGTC 7754 Query 44912 CTGAAGATGGATGCGTTCGGCTGCACCAGTCGCGGTCAGGCCCACCGTGCCGGGCTGTGG 44971 |||| ||||| |||||||| ||| ||||||||||||| || |||| | |||| Sbjct 7753 ACCGAGATCGATGCCTTCGGCTGTACCTCGCGCGGTCAGGCCCGTCGCACCGGCCAGTGG 7694 Query 44972 GTGATAAAGACCGGACTGCTGGAAACGCAGACGGTGGATTTCACGCTCGGGTCACAGGGG 45031 | | | |||| || |||||||| |||| |||| |||| ||||| | || Sbjct 7693 ATCTTGCAAACCGAACGGCTGGAAAAGCAGTCGGTCAGCTTCAATGTCGGGCGCGAAGGC 7634 Query 45032 CTGCGTCACACACCCGGTGACATTATTGAAATCTGTGATAACGACTATGCCGGGACCATG 45091 || || || || || || ||||||||| ||||||| | ||| || | | | Sbjct 7633 ATGAAACATCTGCCAGGGGATATCATTGAAATCGTTGATAACCAGTATACCTGCAGCCGC 7574 Query 45092 ACCGGCGGACGTGTCCTGTCCATCGATGCCGCCAGCCGCACCCTGACGCTGGACCGTGA 45150 | ||| || || || | ||||| || ||||||| | |||||||| || || Sbjct 7573 AGCGGTGGGCGCATCAAGGCCATCAGTG------GCCGCACTGTTACGCTGGATCGCGA 7521 >seq810 Length=78467 Score = 129 bits (142), Expect = 2e-25 Identities = 745/1169 (64%), Gaps = 44/1169 (4%) Strand=Plus/Minus Query 52362 TTTTCCCCCGAAGTCCGTCAGCGGGCGATTCGTATGGTTCTGGAAAGTCAGGATGAATAT 52421 ||||| || | || ||| |||| ||| | || ||||| | || | | || || Sbjct 45062 TTTTCGCCGCAGGTTCGTGAGCGTGCGGTGCGCATGGTGTTCGAGCACCGAGCAGAGTAC 45003 Query 52422 GACTCACAGTGGGCGGCAATTTGTTCCATTGCCCCAAAGATTGGCTGTACGCCGGAGACT 52481 || || ||||||||||| | || || ||| ||||| ||| | ||||| |||| Sbjct 45002 GAATCGCAGTGGGCGGCGGTCGTGTCGATCGCCGGCAAGATCGGCAGCACGCCACAGACG 44943 Query 52482 CTGCGTGTCTGGGTTCGCCAGCATGAGCGGGATACCGGGGGCGGTGATGGAGGGCTCACC 52541 |||| |||||| || ||||| ||||| || || ||| | | | | ||| | ||| Sbjct 44942 CTGCTGAACTGGGTGCGTCAGCACGAGCGTGACAC--GGGCCAGCG-CGAAGGCGTGACC 44886 Query 52542 ACCGCTGAACGTCAGCGTCTGAAAGAGCTGGAGCGTGAAAATCGTGAACTGCGCCGCAGT 52601 || || || |||| | || || |||||||| ||| || || || ||||| Sbjct 44885 ACGGCCGAGGCCAAGCGCGTCAAGGAACTGGAGCGCGAAGTGCGCGAGCTTCGCCGTGCC 44826 Query 52602 AACGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTCGACCGCCTCTGG 52661 ||||| ||||| | ||| ||| | ||| || |||||||| ||||||||| | Sbjct 44825 AACGAGATCCTCAAGCTGGCCAGCGCGTTTTTCGCCCAGGCGGAGCTCGACCGCCGGCTG 44766 Query 52662 AAAAAATG-ATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGCTATGC 52720 || ||| | ||| || |||| || || ||||| | ||||||| ||| | ||| Sbjct 44765 AAGTGATGTACGCCTTTG-TGGACCGGCACCGCCAGCAGCATGGGGTCGAGCCGATCTGC 44707 Query 52721 AGCGAACTGCATATTGCCCCGTCAACGTATTACCACTGTCAGCAACAG-CGACATC---A 52776 || ||||| || ||||| ||| || |||| | || | ||| || || | | Sbjct 44706 AGGCTGCTGCAGATCGCCCCATCAGCG---TACCGGCGGCA-CGCCAGCCGGCAGCGCGA 44651 Query 52777 TCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAGAGATACAGCG 52836 | | | | ||| | ||| || ||||| || | |||| | | || || | Sbjct 44650 TGCTGCCTTGCTCAGCGGCCGAGCCCAGCGAGACCAGGAACTGATGCCCCACATCGAGAG 44591 Query 52837 CGTATACGATGAAAATCACAAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACG 52896 || | | | || | ||| ||||| | || |||||||| || || ||| Sbjct 44590 GGTGTGGCAGGCCAACCTGCGGGTCTACGGGGCCGACAAGGTCTGGCGACAACTGCAACG 44531 Query 52897 GGAAGGTATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATG-GCGGTTATGGGACTTG 52955 ||||| | | ||||| | ||||| |||| || || ||| || | ||||| ||| Sbjct 44530 TGAAGGCGTGCGCGTGGCGCGCTGCACCGTGGAGCGCCTGATGCGCCG-CATGGG-GTTG 44473 Query 52956 C-CGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATCAGC----CG-GAAAGCCGTTG 53009 | || ||| | || || || | | || || || ||| || || | ||| | Sbjct 44472 CGTGGCGTTGTGCGCGGCAAGGTGATGCGCACAACGATCGGCGATGCGCGGGCGCCATGC 44413 Query 53010 CCGCAGGCGACCGCGTAAACCGTCAGTTC-GTG-GCAGAACGACCTGACCAGCTGTGGGT 53067 |||||| |||| || ||||| |||||| ||| |||| || || ||||| ||||||| Sbjct 44412 CCGCAG--GACCTGGTCAACCGGCAGTTCAGTGCGCAG--CGCCCGAACCAGTTGTGGGT 44357 Query 53068 GGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGA 53127 | || || || |||||| || |||||||||| | || ||||| ||| | || || Sbjct 44356 GAGCGACTTCACATACGTCTCGACCTGGCAGGGCTGGCTGTACGTGGCCTTCGTGATCGA 44297 Query 53128 TGTGTTTGCCGGATACATTGTGGGGTGGCGGGTCTCATCGTCCATG-GAGACGACATTCG 53186 ||||| | | ||| ||||| |||||||| | |||| | | ||| |||| Sbjct 44296 CGTGTTCTCGCGGCGCATCGTGGGCTGGCGGGTGAGCACCAGCATGCGGGTGGAC-TTCG 44238 Query 53187 TGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACC--GTCCGGCACGGTCC---- 53240 |||| ||||| ||||||||||| || | || || | || || | ||||||||| Sbjct 44237 TGCTCGATGCTCTGGAGCAGGCCTTGTACGCTCGGCAGCCTGGTGC-GCACGGTCCGCTC 44179 Query 53241 ----ATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAG 53296 |||| || | || || || || || | |||||| ||||||| Sbjct 44178 GTGTGTCACTCCGACAGGGGATCGCAATACGTCAGCATCCGCTACACCGAGCGGCTGGCC 44119 Query 53297 GAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCG 53356 || ||||| | | || ||| || | |||||||| ||||||||||| |||| Sbjct 44118 GAGGCCGGCATCGAACCTTCGGTAGGCAGCAAGGGCGACTCCTATGACAACGCCCTGGCC 44059 Query 53357 GAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACA---CCGTAAGAGCTGGAAAAAC 53413 |||| ||||| || || ||||| || ||| | || || ||| | |||||| | | Sbjct 44058 GAGACGATCAACGGGCTGTACAAGGCCGAGTTGATCCATCGCCGGGCGCCCTGGAAGACC 43999 Query 53414 CGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACGATTG 53473 || | || || |||||||| || || |||||| |||| ||||| | || || Sbjct 43998 CGGGAAGCCGTCGAACTGGCAACCCTGGAATGGGTGTCATGGTTCAACAACCATCGGCTG 43939 Query 53474 CTGGAAAGGCTGGGCCACACTCCTCCGGC 53502 ||| ||||||| || || ||||| Sbjct 43938 ATGGCCCCGCTGGGCTACGTGCCGCCGGC 43910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185243935094728