Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_004902.1 Length=44373 Score E Sequences producing significant alignments: (Bits) Value seq1398 93.3 1e-14 >seq1398 Length=15916 Score = 93.3 bits (102), Expect = 1e-14 Identities = 124/170 (73%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 6239 CGGCATTGTGATCAACCCGATTGACTGGGCGGCGATTGAGCTCGCCAAGGATGCGAACAA 6298 |||||| || |||||||| ||||||||||| || || ||||| ||||| || |||| Sbjct 12756 CGGCATCGTCATCAACCCCATTGACTGGGCTGCTATCGAGCTGACCAAGACCACGGACAA 12697 Query 6299 CCAGTACCTGATTGGCAATGCCCGT-GGCACCCTGACGCCGACCCTGTGGGGTCTGCCGG 6357 ||||||| || ||| |||| ||| | |||| ||||||||||| | || | Sbjct 12696 TGCGTACCTG-TTCGCATCGCCCACCGGCCAGATCGCGCCCACCCTGTGGGGCCGCCCCG 12638 Query 6358 TGGTTGCCACCCAGGCTATGGCTCCGGGCGAATTCCTGGTTGGTGCATTC 6407 |||| ||||| || || |||| | ||| |||||||| ||||||||| Sbjct 12637 TGGTCGCCACGCAAGCCATGGACGCAAACGACTTCCTGGTCGGTGCATTC 12588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141863985739390