Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq251 89.7 4e-13 >seq251 Length=2698768 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 || || | |||||| |||||||| || || || || || ||| | ||| |||| Sbjct 662018 AAAACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCT 661959 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 |||| || || || ||||| ||||| || ||||| || | || | |||||| ||||| Sbjct 661958 TCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCTGGCGGGATACCTTCCTTATCC 661899 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 || || ||||| | ||| |||||| | ||||| || || | || || || Sbjct 661898 TGGATCTTGGCCTTGACATTTTCAATAGTATCGGATGGCTCAACCTCCAAGGTGATGGTC 661839 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || |||||||||||||| || ||||| Sbjct 661838 TTTCCAGTCAAAGTCTTCACAAAGATCTGCAT 661807 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 || || | |||||| |||||||| || || || || || ||| | ||| |||| Sbjct 662474 AAAACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCT 662415 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 |||| || || || ||||| ||||| || ||||| || | || | |||||| ||||| Sbjct 662414 TCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCTGGCGGGATACCTTCCTTATCC 662355 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 || || ||||| | ||| |||||| | ||||| || || | || || || Sbjct 662354 TGGATCTTGGCCTTGACATTTTCAATAGTATCGGATGGCTCAACCTCCAAGGTGATGGTC 662295 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || |||||||||||||| || ||||| Sbjct 662294 TTTCCAGTCAAAGTCTTCACAAAGATCTGCAT 662263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354757031436036