Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq888 84.2 3e-11 >seq888 Length=58548 Score = 84.2 bits (92), Expect = 3e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 40715 CTGGGTGCCTTTCAGGTGAAGCTGTTCATCCCGCGCAATCAGACGCATGATCTTAGCGTT 40774 ||| || || | ||||| ||| || || ||||| || || || |||||||| ||||| Sbjct 22144 CTGCGTACCGGTAAGGTGCAGCGCCTCGTCACGCGCGATGAGGCGGATGATCTTGGCGTT 22203 Query 40775 GCCTTCCATGATACCACGCTCACCGAATGAGAACGTGCAAGCAAAGCTAACATAGAAACG 40834 ||||||||||| ||||| |||| | ||||| ||| || ||||| || ||||| || Sbjct 22204 GCCTTCCATGAGCTTGCGCTCGGCGAAGGCGAACGAGCACGCGAAGCTCACGTAGAAGCG 22263 Query 40835 AATCGCTTC 40843 ||||| || Sbjct 22264 GATCGCCTC 22272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 746176427845680