Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq476 125 3e-24 >seq476 Length=182463 Score = 125 bits (138), Expect = 3e-24 Identities = 225/325 (69%), Gaps = 3/325 (1%) Strand=Plus/Plus Query 10149 GTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAGTCCGTTACCTGCCG 10208 || |||||||| ||| | | || || | || || || ||| ||| ||| ||| Sbjct 52649 GTCAACAAGGTGATTCTTATCGGCAATCTGGGCAAGGACCCCGAAACCCGCTACGCCCCG 52708 Query 10209 AGCGGCGACGCGGT-TGCGAACATCCGTCTCGCGACGACCGATCGATACAAGGACAAGGC 10267 |||||||||||| | ||| |||||| || || || ||||| | |||||||| Sbjct 52709 AGCGGCGACGCGATCTGC-AACATCACGCTGGCCACCACCGACAACTGGCGCGACAAGGC 52767 Query 10268 GAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGGTCGGCTGGC 10327 | |||||| | ||||| || |||||||||||||| ||||||||| ||| || Sbjct 52768 CACCGGCGAAAAGCGCGAGGCCACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGC 52827 Query 10328 TGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCTGTCTACATCGAGGGGCGCATCAA 10387 ||||||| || | || |||||||||||||| || || | || || | | Sbjct 52828 CGAGATCGCCGGCCAGTACCTGCGCAAGGGCAGCCAGGTGTATGTGGAAGGCTCCCTGCG 52887 Query 10388 GACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTACACGACCGAGATCGTCGCTGA 10447 || || ||||||||||| | ||||||||| |||||||| ||||| ||| || || Sbjct 52888 CACCCGCAAGTGGCAGGACAAGGACGGCCAGGACCGTTACACCACCGAAATCCGGGCCGA 52947 Query 10448 CCGCATGCAGATGCTCGGCAAGCCG 10472 | ||| ||||||||||| ||||| Sbjct 52948 CGAGATGAAGATGCTCGGC-AGCCG 52971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204285755655111