Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq4651 86.0 4e-12 >seq4651 Length=474197 Score = 86.0 bits (94), Expect = 4e-12 Identities = 130/183 (71%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 25507 CCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGT 25566 ||||||| ||||| ||| ||||||||||||||| ||||| || || | |||| Sbjct 349771 CCATCAT---CGTGAAGAGCGCGTAGCTGGCGATGTTGAAGGGAACGCCCAGGAAGATGT 349827 Query 25567 CCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACAC 25626 | | | | ||| |||||||| ||||| |||| ||||| |||||| ||||| || Sbjct 349828 CGGCGCTGCG-CTGATAGAGCTGGCACGACAGCTTGCCGTCGGCCACGTAGAACTGGAAC 349886 Query 25627 ATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACG 25686 | | || ||| || || || || || || ||| ||| ||||||||||| ||||| Sbjct 349887 AGCGCGTGGCAGGGCGGCAGGGCCATGCGGTCCACGTCGGCCGGGTTCCAGGCCGACACG 349946 Query 25687 ATG 25689 ||| Sbjct 349947 ATG 349949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340117880203761