Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq3125 86.0 7e-12 >seq3125 Length=3744586 Score = 86.0 bits (94), Expect = 7e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 164785 CATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAAT 164844 |||||| | ||||| || |||||||| | || || || ||||| ||| | || || Sbjct 3687019 CATGATACTGTGGTGAACCAGTTGCTGGCCAAGATCGACGGTGTTGAACAGCTGAACAAC 3686960 Query 164845 ATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCT 164904 || || | | |||||||||||| ||| ||| | ||||| || ||||| | || || Sbjct 3686959 ATCTTGGTGATTGGTATGACCAACAGACGGGATATGATTGACGAGGCTTTGCTGCGTCCA 3686900 Query 164905 GGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATT 164964 |||||||| ||| || | || ||||| | | ||| || | ||||| || | || ||| Sbjct 3686899 GGTCGATTGGAAGTGCAGATGGAAATCAGTCTTCCCAACGAGGAAGGTCGAGTCCAGATT 3686840 Query 164965 TTAAA 164969 || || Sbjct 3686839 TTGAA 3686835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595836567961200