Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq3013 118 1e-21 >seq3013 Length=6250 Score = 118 bits (130), Expect = 1e-21 Identities = 176/246 (72%), Gaps = 9/246 (4%) Strand=Plus/Minus Query 94198 CACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCAGCC 94257 |||||| ||||| ||||||||||||||||| ||| ||| ||||| |||||| ||| Sbjct 5893 CACGGTGAGCGTGGTGTTCAGCAGCAGCACGCCGTTGCGGGCCCACTTGACCAGGCTGCC 5834 Query 94258 GTGGG----CGGGC--GCGGGCAGCGTCGGGT--ACGTCGCCCGG-ACCGCCGCGAAGAT 94308 | | ||| | ||||| | || | | | ||||| | | | | || |||||| Sbjct 5833 GCCCGGCTCCGGCCAGGCGGGAAACGCCACGCCAAGGTCGCGCTGCAGCTCCTTGAAGAT 5774 Query 94309 GTTGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGC 94368 |||| ||| ||| || | | |||| ||| || |||| || |||||||| | ||| Sbjct 5773 GTTGCGCAGCGACGGCGGCAGCTGCACGCCGGGCGCGACGGAAAACGCCAGCCCCTCGGC 5714 Query 94369 CTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCTCGGGCGC 94428 |||||| | ||||||||||||||||| || | ||||||||| ||| |||||||| Sbjct 5713 CTGGCCGCGGCCGTGGTACGGGTCCTGCCCCAGGATGACCACGCGCACGCTCTCGGGCGG 5654 Query 94429 CGTGAG 94434 |||||| Sbjct 5653 CGTGAG 5648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458919909852120