Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4280 201 3e-46 seq73 120 8e-22 >seq4280 Length=912600 Score = 201 bits (222), Expect = 3e-46 Identities = 931/1462 (64%), Gaps = 59/1462 (4%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| || | || || ||||| || ||||| ||||| ||||| ||||| ||||| ||| Sbjct 355974 ATCAAAGGCAAGATCGTGGAACGGCCACAGCACATGTTGATGCGGGTTGCCATTGGAATC 356033 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TATT 363548 || || ||| | || || || ||||| || || || | || || | | |||| Sbjct 356034 CACGGCGAAGATATCGACGCTGCCATTGAGACGTACAATTTGCT--GTCGGAGAGATATT 356091 Query 363549 -CACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607 ||| || || ||||||| |||| || | || | || ||| |||| || | Sbjct 356092 TCACTCATGCTTCGCCAACGATGTTTGCGGCGGCCACCTGCCGACCTCAGCTGTCGTCCT 356151 Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667 |||| || | | |||| ||||| ||||||||| |||| ||||| | ||| | | Sbjct 356152 GCTTCCTGTTGACCATGAGCGACGACAGCATCGAGGGAATCTACGACACCTTGAAGCAGT 356211 Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGT-GCA 363726 |||| | ||||| || || || ||||| || || ||||||| | ||| Sbjct 356212 GTGCGTTGATTTCGAAATCGGCTGGAGGAATCGG---------CCTGAATGTTCATTGCA 356262 Query 363727 -CAGAACAGT-------TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCA 363778 |||| || |||||| ||||| ||| || || || || |||||| Sbjct 356263 TCAGAGCAAAGGGAACCTACATTGCTGGCACGAACGGAATTTCCAACGGTTTGATTCCCA 356322 Query 363779 TGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAG 363838 || | | |||| | || ||||| | |||||| || ||||| || ||||| || Sbjct 356323 TGTTGAGGGTGTACAATAACACTGCCAAGTACGTTGATCAGGGAGGTAACAAGCGGCCAG 356382 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | || ||||| || |||||||| || |||| |||| |||| ||||| || || | Sbjct 356383 GTGCCTTTGCCATTTATCTCGAACCGTGGCATGGCGATGTTTTCGAGTTCCTGGATTTAA 356442 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 ||| ||||| || || || | || || | || ||||||| || |||||| || Sbjct 356443 AGAAGAACACCGGCGCTGAAGATGTCCGAGCCAGGGACATGTTCTACGCGCTTTGGATTC 356502 Query 363959 CTGACCATTTTATGAAGCGCGTGGAGGC-AGGTAAGAATTGGTCACTCTTTTGCCCACAC 364017 | || || |||||||| |||||||| | |||| | ||| | | ||||| || Sbjct 356503 CGGATTTGTTCATGAAGCGAGTGGAGGCTAACGAAGACT-GGTGCTTGATGTGCCCTCAT 356561 Query 364018 GAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077 |||||||| || || ||||| ||||||||| || | || || ||| | || Sbjct 356562 GAATGTCCTGGGCTATCCGACACATGGGGTGAGGAGTTTGAAAAACTGTACACATCATAC 356621 Query 364078 GAATCGGAGGGAA---AGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134 ||| |||| ||| | ||| || | | || || | | |||||||| ||| Sbjct 356622 GAAGCGGAAGGACGATACATTCGGAA---AGTGAAAGCCCAAGATTTGTGGTTTGCAATC 356678 Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194 || || || || | || || || || || ||| |||| || ||| | |||||| | Sbjct 356679 ATCGAGTCCCAAGTGGAAACCGGTGTTCCGTACATGCTGTATAAGGATGCTTGCAACAGG 356738 Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATT 364251 || || |||||| || | || || || || || || ||||| || ||||| ||| Sbjct 356739 AAAAGTAATCAGCAGAACATCGGAACCAT-CA--AGTGCTCAAACCTTTGCACCGAAATT 356795 Query 364252 ATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 |||||||| || | || || | ||| || |||||||| ||||| ||||| | Sbjct 356796 GTTGAATACTCCTCCAAGGATGAAATTGCTGTTTGTAACCTAGCGTCCATCGCATTGAAC 356855 Query 364312 GCGTTTGTAAAA---GATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCAT 364368 ||| || ||| || || | ||| ||| | || | || ||| | | | Sbjct 356856 ATGTTCGTGAAACCCGACAAGACATATGATTTCCAAAAACTGAAAGAAGTAGCAAAAATT 356915 Query 364369 GCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAG 364428 || ||| |||||| |||| | ||||||| |||| |||||| | || || ||| || Sbjct 356916 GCCACTAAGAATCTCAACAAAATCATCGACATTAATTTCTATCCAGTGCCAGAGGCCAAG 356975 Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488 || || |||||||| || |||||||| || | ||||| ||||| | || || | || Sbjct 356976 CGATCCAATATGCGCCACCGCCCGATCGGAATCGGTGTCCAGGGAATGGCCGATGCCTTC 357035 Query 364489 AT---GATGCTCAAGATGGCATTTGATTCGCCT-GACGCTCGTGTTCTAAATAAGGAGAT 364544 || ||||| | | | || || || |||| || ||| || | || Sbjct 357036 ATTTTGATGC----GTTATCCTTACGACAGCGAAGAAGCTCAAAAACTGAATCAGCAAAT 357091 Query 364545 CTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGG 364604 ||| ||||| || || | || || | || ||||| ||||| ||| |||| Sbjct 357092 CTTCGAAACTATCTACTATGGTGCCTTAGAAGCAAGCTGTGAATTGGCCGAAAAGGAGGG 357151 Query 364605 AAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATG 364664 | ||| || ||| ||| | || | ||||| | |||| ||| | || Sbjct 357152 TACCTACGAAACCTATCCGGGATGTCCGGTGAGCAAGGGAGTTCTGCAGTACGATATGTG 357211 Query 364665 GAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGA---- 364720 ||| |||| | | | ||| | |||| || | || || | |||| Sbjct 357212 GAACAAAGAGCCAACAGACATGTGGGATTGGG-----CTGCCTTG-AAGGAAAAGATCGC 357265 Query 364721 --AGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACA 364778 ||||||| |||||| ||||| || || || |||||||||||||| || || || Sbjct 357266 CAAGCATGGCGTTCGCAATTCCCTGCTTCTGGCTCCGATGCCCACGGCTTCGACGGCGCA 357325 Query 364779 GATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGT 364838 || || ||||||||||| | |||||||||| || ||| |||| || || || Sbjct 357326 AATTCTTGGAAACAACGAATCATTCGAACCGTACACTTCCAACGTTTACAACCGACGAGT 357385 Query 364839 TCTTTCCGGAGAATTTCCGGTA 364860 || ||||||||||| | |||| Sbjct 357386 GCTGTCCGGAGAATTCCAGGTA 357407 Score = 107 bits (118), Expect = 5e-18 Identities = 200/290 (69%), Gaps = 8/290 (3%) Strand=Plus/Plus Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930 |||| | |||||||| |||| | | |||||| |||| |||||| ||| || | Sbjct 359309 ACCTGCTAAAGGATCTCACCGAGCTGGATTTGTGGGATGACGACATGAAAAACCGAATTA 359368 Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC--AGAAGATCTGAAGCCTAT 364988 | || || || || | |||||||| || | | || || | ||| | |||| Sbjct 359369 TTGCAAACAACGGATCAATCCAGAACATCGAAGAAATCCCGCAGCACATCCGCGATCTAT 359428 Query 364989 TTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGG 365048 |||||||||| |||||||| ||| | | | ||| | ||||| |||||||| || Sbjct 359429 --ACAAAACCGTGTGGGAAATCTCCGTCAAGAGTTGCATCAAGATGGCAGCCGATCGTGG 359486 Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGCC 365106 |||||| ||| |||| || ||||| ||| ||||| || || |||| | || || | Sbjct 359487 TGCTTTCATCGATCAGTCGCAATCGTTCAAC--ATTCACGTGGCTGAGCCCAACTACGGC 359544 Query 365107 AAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || ||||| || || || ||||||||||||||| || || ||||| || Sbjct 359545 AAACTTACCTCGATTCACTTCTACGGGTGGAAAATGGGACTGAAGACCGG 359594 >seq73 Length=471406 Score = 120 bits (132), Expect = 8e-22 Identities = 225/325 (69%), Gaps = 12/325 (4%) Strand=Plus/Minus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||||||||| || || || |||||||| |||||||| || ||||| || | || ||||| Sbjct 408266 AGGTGATCTAGGCCCGGTATACGGATTCCAATGGCGTCATTTTGGCGCCAAATATAAAAC 408207 Query 111548 CATGCAC----GACT-CATATGATTCACAGGGAACTGATCAATTA-CAGAATGTCATTGA 111601 ||||| |||| || | | ||||| | || || ||| ||||| || || | Sbjct 408206 -ATGCAATGATGACTACACAGGG----CAGGGTATCGACCAGTTAGCAGAA-GTGATAAA 408153 Query 111602 TCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGC 111661 || ||||||| ||| ||||| ||| || ||||| ||||||||||||||||| | | Sbjct 408152 TCGCATTAAGACCAATCCAACGGATCGACGTATTATCATGAGTGCATGGAACCCGATAGA 408093 Query 111662 ATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGG 111721 | | ||||||| ||||| || || ||| || || |||| || | || Sbjct 408092 TATCCCACAAATGGCCCTTCCTCCTTGCCATTGCTTGGCGCAATTTTTCGTGGCAAATGG 408033 Query 111722 GATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAA 111781 ||||| || || | ||||| ||||| |||||||| || || || || || || || Sbjct 408032 AGAACTTTCGTGTCAGTTATATCAACGATCAGCTGATATGGGCCTCGGAGTCCCATTCAA 407973 Query 111782 TATTGCAAGTTACGCACTACTTACT 111806 ||| || ||||| || |||| ||| Sbjct 407972 TATCGCTAGTTATGCTTTACTGACT 407948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303274161819974