Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq986 102 7e-17 >seq986 Length=4314454 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| || | || || | || |||||| | Sbjct 1408944 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCTTCG 1409003 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| ||||| ||||| || ||||| |||||| Sbjct 1409004 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCAGATCAA 1409063 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||||| || ||| || || || ||||||| | | | |||||| ||| Sbjct 1409064 CAGCGTCTGATTTTCGCCGGTAAACAGCTAGAAGATGGTCGTACTCTATCCGATTACAAC 1409123 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || ||||| |||| || || Sbjct 1409124 ATTCAAAAGGAGTCTACCCTTCACTTGGT 1409152 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| || | || || | || |||||| | Sbjct 1407804 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCTTCG 1407863 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || |||||| ||||| |||||||| || || ||||| Sbjct 1407864 GACACCATCGAGAACGTTAAGGCCAAGATTCAGGACAAGGAAGGCATCCCACCAGATCAG 1407923 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | | ||| ||||| ||||| |||| | | | |||||| ||| Sbjct 1407924 CAGCGTCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGTACTTTGTCCGATTACAAC 1407983 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 || || ||||||||||| ||||| Sbjct 1407984 ATCCAGAAAGAATCTACCCTTCAT 1408007 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| || | || || | || |||||| | Sbjct 1408488 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCTTCG 1408547 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || || ||||| ||||| |||||||| || || ||||| Sbjct 1408548 GACACCATCGAGAACGTTAAGGCCAAGATCCAGGACAAGGAAGGCATCCCACCAGATCAG 1408607 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA--ACGTCAGCGATTATA 24168 ||| | ||||| | | ||| ||||| ||||| |||| | | |||| || || | Sbjct 1408608 CAGCGTCTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGTACTCTGTCA--GACTACA 1408665 Query 24169 ACATTCAAAAAGAATCTACAATTCAT 24194 |||| || ||||||||||| ||||| Sbjct 1408666 ACATCCAGAAAGAATCTACCCTTCAT 1408691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429911074057335