Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq885 226 8e-55 >seq885 Length=61233 Score = 226 bits (250), Expect = 8e-55 Identities = 281/383 (73%), Gaps = 4/383 (1%) Strand=Plus/Minus Query 35488 GCCGGCCTATGCCACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCGCC 35547 ||||||||| |||||| | | || || |||||||||| ||| ||||||||||| Sbjct 13976 GCCGGCCTACGCCACCAGCGGCTCGGCCGGGCTGGACCTGCGCGCCTGCCTGGAGGCGCC 13917 Query 35548 GATGACGTTGCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGC 35607 || | || ||||||| | | ||||| | |||| ||||||||||||||||||||| Sbjct 13916 CATCAACCTGGCGCCGGGCCACACCACGCTGGTGCCCACCGGCATCGCGATCCATCTGGC 13857 Query 35608 CGACCCGCAGCTGTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCAT 35667 ||||||| ||| ||| |||||||||| ||||||||||| ||||| |||||||| Sbjct 13856 CGACCCGGGCCTGGCGGCGATGATCCTGCCCCGCTCGGGGCTGGGCCACAAGCACGGCAT 13797 Query 35668 CGTACTCGGCAAC--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATC 35725 ||| || |||||| ||| ||| || |||||| |||| ||||||||| | | || | Sbjct 13796 CGTGCTGGGCAACCTGGT--CGGGCTGATCGATTCGGACTACCAGGGGCAGATCTTCGTG 13739 Query 35726 AGCACCTGGAATCGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAG 35785 |||||| ||||||| ||| |||||||||| ||||| || || | || ||| Sbjct 13738 TCGGTCTGGAACCGCGGCCACGACCACTTCACCATCCAGCCGATGGAGCGCGTCGCCCAG 13679 Query 35786 CTGGTGATCCTGCCGGTCGTGCGCGTAGGCTTGCGAGTGGTGGACACTTTCGTCGACAGC 35845 |||||| | ||||||| ||| || ||||| ||||| || | |||| ||| ||| Sbjct 13678 CTGGTGGTGGTGCCGGTGCTGCAGGTGGGCTTCAACGTGGTCGAATCCTTCGACGAGAGC 13619 Query 35846 GCGCGCGGCGCGGGTGGATTCGG 35868 | |||||||| || || ||||| Sbjct 13618 GAGCGCGGCGACGGCGGCTTCGG 13596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149127575400570