Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq251 86.0 5e-12 >seq251 Length=2698768 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | ||| |||| ||| || || |||||| || |||||||| || | | Sbjct 661805 CCTCCACGGAGACGCAGAACCAGATGAAGGGTACTCTCCTTCTGGATGTTGTAATCCGAC 661746 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||||| || || || || | || | ||||| || ||| || Sbjct 661745 AGGGTACGGCCATCCTCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCCGGGGGG 661686 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || || |||||| | | | ||||| ||| || Sbjct 661685 ATTCCCTCCTTATCCTGGATCTTGGC--CTTCACATTCTCGATCGTGTCCGAGGGTTCGA 661628 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||||||| || ||||| || |||||||| |||||||||||| Sbjct 661627 CCTCCAAGGTGATGGTCTTACCGGTTAGGGTTTTGACGAAAATCTGCATT 661578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405064514643430