Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq98 334 8e-87 seq4284 206 3e-48 seq4600 201 1e-46 seq2752 111 2e-19 seq877 111 2e-19 seq189 111 2e-19 seq4738 109 6e-19 >seq98 Length=5729030 Score = 334 bits (370), Expect = 8e-87 Identities = 650/948 (69%), Gaps = 20/948 (2%) Strand=Plus/Plus Query 92743 TAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACAT 92802 ||||| || || || ||||| || |||||||||||| |||| ||||||||| || Sbjct 2603111 TAGAAGTCGGCGTCCAGTGTGAACACATTGTCAAGTCGATTGGC---CATAACACCCCAC 2603167 Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 || || || || || ||||| || |||||||| || || || ||||| | || || ||| Sbjct 2603168 TTCTGATACTCTCCTACTTTCTTCTCAAAGAAGTTAGTTTTACCTTCAAGCGAAAT-GAA 2603226 Query 92863 TTCACTAG---TGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAA 92919 || || | | |||||||| | || ||| ||| || || ||||||| || Sbjct 2603227 CTCCATAAAACTAAAGGGATTCTTCGTATTGTAAATCTTATCGATGACCAACTCGAGCAG 2603286 Query 92920 TAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAG 92979 | || |||||| || ||||| || ||||| |||| | ||||||||||| || || || Sbjct 2603287 CAGTCCATCAGCCACGAATTCAATATACTGCGACAAAAGGTCACAATTCATGCCAAGCAG 2603346 Query 92980 ACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGAT 93039 || || || | | |||| ||| || | | ||| | || | ||| | | Sbjct 2603347 GTCAACCGGAAGGGTTTTCGTCAGGAATTCCTGTTTGATCAGGACTGTTTCGCGGATAAA 2603406 Query 93040 TTCTATTAC-TCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAA 93098 || || || | | || | || |||||| ||||| | ||| ||| |||| | | ||| Sbjct 2603407 CTCGATCACATGTTCT-TGTGATGGTTTCTGTACCAGATATTTGAACATAAGAGAAACAA 2603465 Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTA 93158 | || | || | |||||||| ||||| ||||| || | | |||||||| || || Sbjct 2603466 ATTCCATGTGCAGGCCTTCGTCACGTGAGATCAATTCGTAGGAGAATGTTAGCCCAGGCG 2603525 Query 93159 ACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA--GaaaaaaaTATACC 93216 |||||| || ||||| | |||| || || || ||||| ||| ||| ||||| | | Sbjct 2603526 TCAGTCCACGCTTCTTCAACCAATTGATGGATGCGAAACTTCCACTGAAGAAAATTT--C 2603583 Query 93217 TTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGA--TC 93274 |||||| | || || || || | ||||| | || || || || || ||| || Sbjct 2603584 TTCCACAACGGCGAAGGCTACGACGCGTTCTCCGAAGTTGGCCTTTTTGCT--TGAATTC 2603641 Query 93275 CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAAT 93334 || || || | | | || ||||| ||||| | ||| || || | ||||| || || || Sbjct 2603642 CAGTTCAATGTCTATTCAGCTTTCTTCTTCACACAGGGCAGATTATCGATGGCATTGAAC 2603701 Query 93335 AGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCA 93394 | ||| || | | | ||||| || || || |||||||| | ||| || ||||||||| Sbjct 2603702 AAGTACTCCCTTTGTTTGGAATCACGAATATAAGTATCGATAAGCAGCGAGTACATTTCA 2603761 Query 93395 GAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGC 93454 ||||| || |||||||| ||||| ||||| ||||| || | || || |||| ||| Sbjct 2603762 CTGTGGACGTTTTCCATTGCCATTTGAAATCCATAGAAGCAACGTGCCTCGGTGACCTGG 2603821 Query 93455 ACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514 | || || || | || ||||| || || || | | |||||||| || |||| Sbjct 2603822 AGCTCCTGGCTGAAACGTTCCACGAGGTTCTCGTTCATGCTGCCATCGGAAGCGACAAAG 2603881 Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGAT 93574 || ||||||| ||| || || || ||||| | || ||||| |||||||||| | Sbjct 2603882 AAGGCCAATACATGTGAGATGAAGTGCTTCTCGCCTGACTTGAGCTTTTCCCAATCGGCT 2603941 Query 93575 AGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTAC 93634 |||||||| || ||||||||||| || | ||||| | ||||| ||||| | || ||| Sbjct 2603942 AGATCTTTAGAGAGATCGACTTCCTCTATTGTCCAGAGAGATGCCTCTGCCTACTTCTAC 2604001 Query 93635 ATATCCCATATGTCTTGATATTGAATTGG--AAAT-ATGACAAAACGA 93679 || | ||| ||| | ||||| || || || |||| ||||| |||||| Sbjct 2604002 ATCTGCCAAATGCCATGATACTGGATGGGGAAAATGATGACGAAACGA 2604049 >seq4284 Length=891408 Score = 206 bits (228), Expect = 3e-48 Identities = 309/436 (71%), Gaps = 2/436 (0%) Strand=Plus/Minus Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967 ||||||| || | ||||||||| || ||||| || ||||| ||||| | |||||||| Sbjct 85552 CAACTCGAGCAGCAGTCTATCAGCCACGAATTCAATATACTGCGACATAAGGTCACAATT 85493 Query 92968 CATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGC 93027 ||| || || || || || || || | |||| ||| || | ||||| | || || Sbjct 85492 CATGCCAAGCAGGTCAACCGGAAGGGCTTTCGTCAGGAACTCCTGTTCGATCAGGACTGC 85433 Query 93028 TTCTTTCAAGATTTCTATTACTC-TACTATTTGGTGGTTTTTGTACGACATAATTGTACA 93086 ||| | || || || || | | || | || |||||| ||||| | ||| ||| ||| Sbjct 85432 TTCGCGGATAATCTCGATCACACGTTCT-TGTGATGGTTTCTGTACCAGATATTTGAACA 85374 Query 93087 TTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATG 93146 | | || |||||||| || || | |||||||| ||||| ||||| || ||| ||||| Sbjct 85373 TAAGACAAGCAAAGTCCGTGTGCAGGCCTTCGTCACGTGAGATCAATTCGTTGGAGAATG 85314 Query 93147 TTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaa 93206 ||| || || | |||||| || ||||| | |||||| || || || ||||| ||| || Sbjct 85313 TTAGCCCAGGCATCAGTCCACGCTTCTTCAACCAAAAGATGGATGCGAAACTTCCACTAA 85254 Query 93207 aaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTAC 93266 | || |||||||||||||| || || || || | ||||| | || || || || | Sbjct 85253 AGAAAATACCTTCCACGGCGGCGAAGGCTACGACGCGTTCTCCGAAGTTGGCCTTTTTGC 85194 Query 93267 TGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326 | ||||| || || ||||| || ||||| ||||| | ||| || || | ||||| | Sbjct 85193 TTGAAATCCAGTTCAATGCCCAGTCAGCTTTCTTCTTCACACAGGGCAGATTATCGATGG 85134 Query 93327 CGTTAAATAGGTAATC 93342 |||| || | ||| || Sbjct 85133 CGTTGAACAAGTACTC 85118 Score = 179 bits (198), Expect = 4e-40 Identities = 203/272 (75%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 ||||| || ||||| ||||| || | ||| || ||||||||| |||||||| |||||| Sbjct 84842 GAATCGCGAATGTAAGTATCAATAAGCAGCGAGTACATTTCACTGTGGACATTTTCCATT 84783 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 |||||||| ||||||||||| || | ||||| |||| ||| || || || || | Sbjct 84782 GCAATTTGAAATCCGTAGAAGCAACGCGCTTCGGTGACCTGGACCTCCTGGCTGAAACGT 84723 Query 93473 TCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT 93532 || || || || || || || || |||||||| || ||||| || |||| | ||| Sbjct 84722 TCCACAAGGTTCTCGTTCACGATGCCATCGGAAGCGGCAAAGAAGGCCAGCACATGTGAG 84663 Query 93533 ATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCG 93592 || || || ||||| | || ||||| |||||||||| |||||||| || |||||| Sbjct 84662 ATGAAGTGCTTCTCGCCGGACTTGAGCTTTTCCCAATCGGCCAGATCTTTAGAGAGATCG 84603 Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||||| || || ||||| || ||||| ||||| Sbjct 84602 ACTTCCTCTACTGTCCAGAAAGATGCCTCTGC 84571 >seq4600 Length=436310 Score = 201 bits (222), Expect = 1e-46 Identities = 292/410 (71%), Gaps = 3/410 (1%) Strand=Plus/Plus Query 93273 TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAA 93332 |||| || || | | | || ||||| ||||| | ||| || || | ||||| || || | Sbjct 110418 TCCAGTTCAATGTCTATTCAGCTTTCTTCTTCACACAGGGCAGATTATCGATGGCATTGA 110477 Query 93333 ATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTT 93392 | | ||| || | | | ||||| || || || |||||||| | ||| || ||||||| Sbjct 110478 ACAAGTACTCCCTTTGTTTGGAATCACGAATATAAGTATCGATAAGCAGCGAGTACATTT 110537 Query 93393 CAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCT 93452 || ||||| || |||||||||||||| ||||| ||||| || | || || |||| || Sbjct 110538 CACTGTGGACGTTTTCCATTGCAATTTGAAATCCATAGAAGCAACGTGCCTCGGTGACCT 110597 Query 93453 GCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaa 93512 | | || || || | || ||||| || || || | | |||||||| || ||| Sbjct 110598 GGAGCTCCTGGCTGAAACGTTCCACGAGGTTCTCGTTCATGCTGCCATCGGAAGCGACAA 110657 Query 93513 aaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGG 93572 | || ||||||| ||| || || || ||||| | || ||||| |||||||||| Sbjct 110658 AGAAGGCCAATACATGTGAGATGAAGTGCTTCTCGCCTGACTTGAGCTTTTCCCAATCGG 110717 Query 93573 ATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGT 93632 ||||||||| || ||||||||||| || | ||||| | ||||| ||||| | || | Sbjct 110718 CTAGATCTTTAGAGAGATCGACTTCCTCTATTGTCCAGAGAGATGCCTCTGCCTACTTCT 110777 Query 93633 ACATATCCCATATGTCTTGATATTGAATTGG--AAAT-ATGACAAAACGA 93679 |||| | ||| ||| | ||||| || || || |||| ||||| |||||| Sbjct 110778 ACATCTGCCAAATGCCATGATACTGGATGGGGAAAATGATGACGAAACGA 110827 Score = 89.7 bits (98), Expect = 6e-13 Identities = 146/208 (70%), Gaps = 7/208 (3%) Strand=Plus/Plus Query 92743 TAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACAT 92802 ||||| || || || ||||| || |||||||||||| | || ||||||||| || Sbjct 109122 TAGAAGTCGGCGTCCAGTGTGAACACATTGTCAAGTCG---GTTGGCCATAACACCCCAC 109178 Query 92803 TTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAA 92862 || || || || || ||||| || |||||||| || || || ||||| | || || ||| Sbjct 109179 TTCTGATACTCTCCTACTTTCTTCTCAAAGAAGTTAGTTTTACCTTCAAGCGAAAT-GAA 109237 Query 92863 TTC---ACTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAA 92919 || | | | | |||||||| | || ||| ||| || || ||||||| || Sbjct 109238 CTCCATAAAACTAAAGGGATTCTTCGTATTGTAAATCTTATCGATGACCAACTCGAGCAG 109297 Query 92920 TAATCTATCAGCTACAAATTCTATGTAC 92947 | ||||||||| || ||||| || ||| Sbjct 109298 CAGTCTATCAGCCACGAATTCAATATAC 109325 >seq2752 Length=6749 Score = 111 bits (122), Expect = 2e-19 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 6470 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 6529 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 6530 GTGGGTTCGAACCCCACTTCTGACA 6554 >seq877 Length=4402401 Score = 111 bits (122), Expect = 2e-19 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 2565892 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 2565833 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 2565832 GTGGGTTCGAACCCCACTTCTGACA 2565808 Score = 109 bits (120), Expect = 6e-19 Identities = 78/89 (88%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 2608503 AGTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 2608562 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATT 126351 ||||||||||||||||| |||||| ||| Sbjct 2608563 GTGGGTTCGAACCCCACTTCTGACACATT 2608591 >seq189 Length=4040890 Score = 111 bits (122), Expect = 2e-19 Identities = 77/85 (91%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGC 126322 |||||| |||||||| |||||||||||||||||||||| |||||||||| || |||||| Sbjct 2194914 AGTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGC 2194855 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 2194854 GTGGGTTCGAACCCCACTTCTGACA 2194830 >seq4738 Length=2816416 Score = 109 bits (120), Expect = 6e-19 Identities = 76/84 (90%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCG 126323 ||||| |||||||| |||||||||||||||||||||| |||||||||| || ||||||| Sbjct 2070942 GTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGCG 2071001 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||| |||||| Sbjct 2071002 TGGGTTCGAACCCCACTTCTGACA 2071025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556827687664680