Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_008946.1 Length=4692 Score E Sequences producing significant alignments: (Bits) Value seq553 82.4 2e-12 >seq553 Length=165324 Score = 82.4 bits (90), Expect = 2e-12 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 3230 TACTACGAATGGGTCTTCATCGTGTTATTCTTGCAAGCAGTATCATACTACATACCACGT 3289 ||||| ||||||||| | ||||||||||||| ||||| | | || |||| | || || Sbjct 89072 TACTATCAATGGGTCTGCTTCGTGTTATTCTTCCAAGCCATGTTATTCTACGTTCCTCGC 89013 Query 3290 TTCATTTGGAAGTCATGGGAAGGAGGAAGAATCCAGATGCTGG 3332 | | |||||| ||||||||| ||| |||||| ||||| ||| Sbjct 89012 TATCTCTGGAAGACATGGGAAGCAGGCAGAATCAAGATGTTGG 88970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14901624632785