Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_009016.1 Length=38197 Score E Sequences producing significant alignments: (Bits) Value seq265 284 3e-72 seq476 235 1e-57 >seq265 Length=448903 Score = 284 bits (314), Expect = 3e-72 Identities = 525/755 (70%), Gaps = 34/755 (5%) Strand=Plus/Plus Query 20873 CAGGTGCTTGCGACACCCGACT-GCCGTCAACCCACATGAGCATGCCATGTGAGCCGACC 20931 |||||| | || |||||| | ||||||||| |||| |||| | || |||||| | ||| Sbjct 64308 CAGGTGAT-GCAACACCCAGCGAGCCGTCAACACACA-GAGC-TACCCTGTGAGTCAACC 64364 Query 20932 ACGGCC-TCCCTGCC-TCG-CGAGGCGCGGGAAGCCTATCCGATCATCTTTCAAATTGCA 20988 | |||| | |||| | ||| ||| || |||||||||| | || || || | || | Sbjct 64365 AAGGCCCTTCCTGTCATCGACGA--CGGGGGAAGCCTACCTTATTTTCACTCTA--TGAA 64420 Query 20989 AAGGAAAGGCTCACT-------AATGAGTAATAA--ACCAtttttttCATGGATGGGTGG 21039 || ||||| || || || ||| ||| || || | ||||| || || Sbjct 64421 AA----AGGCTTACAGAGAATGAAAGACCAATCTTTACCCATTGTTCCCTGGATTGGGGG 64476 Query 21040 CAAGCGCCGCCTGGCTAAACACATCCTGCCAGAGTTCCCAGAGCACGAGTGCTATGTGGA 21099 ||| || |||||||| ||||| |||||||| ||||| ||||| || ||||| || Sbjct 64477 CAAACGTCGCCTGGCAAAACATATCCTGCCGTTATTCCCGAAGCACACATGTTATGTCGA 64536 Query 21100 GCCGTTCTGTGGGGCCGCTGCCCTGTTTTTTATGAAGATGCCGACCAAGGTTGAAGTCAT 21159 ||||||||| || || || || |||| ||| ||||| || | |||| || || || Sbjct 64537 GCCGTTCTGCGGCGCGGCGGCGCTGTACTTTTTGAAGGCTCCCAGCAAGACCGAGGTGAT 64596 Query 21160 CAACGACGTGAACAGCGACCTGGTTAACCTGTACCGCGTGGTGCAGCATCACCTCGAGGA 21219 ||||||| | ||| | || | || |||||||| |||||||| |||||||||| || || Sbjct 64597 CAACGACATTAACGGTGAGTTAGTGAACCTGTATCGCGTGGTCAAGCATCACCTGGAAGA 64656 Query 21220 GTTCGTCCGCCAGTTCAAATGGGCGCTTATCAGCCGCGAGATGTTCAAGTGGCTGGACGA 21279 ||| || || |||||||| |||||||| |||||||| |||| | ||||||||| | | Sbjct 64657 GTTTGTGCGGCAGTTCAAGTGGGCGCTGGTCAGCCGCCAGATTTATAAGTGGCTGCAGGC 64716 Query 21280 TACGCCCGTCGAGACCCTGACCGATATTCAGCGTGCTGCCCGGTTCTATTACCTGCAGCA 21339 || || | || |||||||||||||| |||||||| ||||||||||||||||||||| | Sbjct 64717 CACCCCGGAAGAAACCCTGACCGATATCCAGCGTGCAGCCCGGTTCTATTACCTGCAGAA 64776 Query 21340 GATGGGCTTCGGCGCCAAGATTACCGGCCGCACCTTTGG---CACGGCCACCACTACGCC 21396 | | |||||||| |||| | | | | || ||||| || |||||| | |||| Sbjct 64777 GCAAGCCTTCGGCGGCAAGGTGGCTGAGCAGACGTTTGGGGTATCGACCACCAGTGCGCC 64836 Query 21397 GCCAAAACTGAACCTGCTGCGCCTCGAGGAGACGCTAAGCCAGGCGCACCTACG--CCTG 21454 | | |||||||||||| | || ||| | | ||||||||| || | Sbjct 64837 CC---GTTTCAACCTGCTGCGCATTGAAGAGGAGTTGTCGATGGCGCACCTGCGGTTATC 64893 Query 21455 AGCCGTGTTTACGTTGAGCACCTGGACTGGCAGGCGTGCATGGAAAAGTACGACCGACCG 21514 | | | | | | ||||| |||||||| | ||||| || || || || Sbjct 64894 ACGCACGCTGA--TCGAGCATATGGACTGGGCCACCTGCATCCGGCGCTATGATCGGCCC 64951 Query 21515 CACACCCTGTTTTACCTCGACCCGCCGTACTGGCAGACCGAGGGCTACGGTGTCGACTTC 21574 ||||||||||| ||| |||||||||||| ||| || || || || || || |||||| Sbjct 64952 CACACCCTGTTCTACTGCGACCCGCCGTATTGGGGCACGGAAGGTTATGGCGTGGACTTC 65011 Query 21575 CCCTTCGAGCAATATGAGCGCATGGCTGAGATGGC 21609 | | ||| | || || | ||||| | | |||| Sbjct 65012 GGCCTGGAGAACTACGACCTGATGGCGGCGCTGGC 65046 >seq476 Length=182463 Score = 235 bits (260), Expect = 1e-57 Identities = 473/696 (68%), Gaps = 8/696 (1%) Strand=Plus/Plus Query 21029 TGGATGGGTGGCAAGCGCCGCCTGGCTAAACACATCCTGCCAGAGTTCCCAGAGCACGAG 21088 ||||| || ||||||||||| ||||| || ||| | ||||| || || |||||| || Sbjct 143873 TGGATCGGCGGCAAGCGCCGGCTGGCGAAGCACCTGCTGCCGCTCTTTCCCGAGCACCAG 143932 Query 21089 TGCTATGTGGAGCCGTTCTGTGGGGCCGCTGCCCTGTTTTTTATGAAGATGCCGACCAAG 21148 ||||| || ||||||||||| || || || || ||||| || ||||| || ||| Sbjct 143933 TGCTACGTCGAGCCGTTCTGCGGAGCGGCCGCGCTGTTCTTCATGAAACCTCCAGTGAAG 143992 Query 21149 GTTGAAGTCATCAACGACGTGAACAGCGACCTGGTTAACCTGTACCGCGTGGTGCAGCAT 21208 | ||||| ||||||||| | ||| |||| ||||| || ||||||||||||||| | Sbjct 143993 GCCGAAGTGATCAACGACATCAACGGCGAGCTGGTGAATCTGTACCGCGTGGTGGCCAAC 144052 Query 21209 CACCTCGAGGAGTTCGTCCGCCAGTTCAAATGGGCGCTTATCAGCCGCGAGATGTTCAAG 21268 || | |||||||| ||||||| |||| ||| | ||| | | || || ||| Sbjct 144053 CATTTGACTGAGTTCGTTAAGCAGTTCAGATGGTCGCCGGTGAGCAGGCAAATCTTTAAG 144112 Query 21269 TGGCTGGACG-ATACGCC--CGTCGAGACCCTGACCGATATTCAGCGTGCTGCCCGGTTC 21325 || || || | |||| || | | ||| || ||||||||||| ||||| |||||| Sbjct 144113 TG---GGCCGTAGCCGCCGAAGTAGCGGGCCTTACGGATATTCAGCGCGCTGCGCGGTTC 144169 Query 21326 TATTACCTGCAGCAGATGGGCTTCGGCGCCAAGATTACCGGCCGCACCTTTGGCACGGCC 21385 || |||||||| | | | ||||| |||| | | || | | ||| ||||| | Sbjct 144170 TACTACCTGCAACGGCTTGGCTTTGGCGGCGTCGTCGAAGGGCACCGCTTCGGCACCTCA 144229 Query 21386 ACCACTACGCCGCCAAAACTGAACCTGCTGCGCCTCGAGGAGACGCTAAGCCAGGCGCAC 21445 || || ||| | |||| ||| ||||| | |||||| || ||| || Sbjct 144230 ACAACAACGGGGGTGCGGCTGAGTCTGATGCGCATTGAGGAGGATCTGTCGGCGGCACAT 144289 Query 21446 CTACGCCTGAGCCGTGTTTACG-TTGAGCACCTGGACTGGCAGGCGTGCATGGAAAAGTA 21504 || ||| || || | ||| |||||||||| |||||||| | |||||| || Sbjct 144290 CTTCGCTTG-GCGCGGGCGACGATTGAGCACCTCGACTGGCACGAGTGCATCACCCGCTA 144348 Query 21505 CGACCGACCGCACACCCTGTTTTACCTCGACCCGCCGTACTGGCAGACCGAGGGCTACGG 21564 |||||| || ||||| ||||| ||| ||| ||||| |||||| ||||| || ||||| Sbjct 144349 CGACCGGCCCCACACGCTGTTCTACTGCGATCCGCCTTACTGGGGCACCGAAGGGTACGG 144408 Query 21565 TGTCGACTTCCCCTTCGAGCAATATGAGCGCATGGCTGAGATGGCCAGGACGGTGAAGGG 21624 || || ||| | | | || || || ||||| ||| ||||| ||||| | ||||| Sbjct 144409 CGTGGAGTTCGGACTGGGTGAGTACGACCGGATGGCCGAGCTGGCCCGGACGATCAAGGG 144468 Query 21625 TAAGGTGGTGATCAGCATCAACGACCACCCGGATATCCGAAAGGCGTTCGCCGGCTTCCG 21684 | |||||||| | || ||| || || || || || |||| |||| | || Sbjct 144469 CCGGATGGTGATCTCGGTGAATGACATTCCCGAGATGCGTCGCGCCTTCGACGGCCTGCG 144528 Query 21685 GATGCAGGAAGTTAGCCTGCGCCATACCGTTGGCGG 21720 |||| || ||| ||| | |||| || ||||| Sbjct 144529 GATGGAGCGCGTTGAACTGGCCTATACGGTCGGCGG 144564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122101902150206