Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_009821.1 Length=164270 Score E Sequences producing significant alignments: (Bits) Value seq888 161 1e-34 >seq888 Length=58548 Score = 161 bits (178), Expect = 1e-34 Identities = 285/410 (70%), Gaps = 4/410 (1%) Strand=Plus/Plus Query 135801 ATTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACCCCCTTATTGTT 135860 ||| ||||| || || ||||| | ||||||||||||||| || ||||| || ||||| Sbjct 24157 ATTGATCTGCACACCATAGTCCAAATGGCGAATGCGGTTTTCCTCCACACCGCGGTTGTT 24216 Query 135861 CTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCGCCGC 135920 ||| | ||| | ||| ||| | || | ||||||| ||||| | || || ||||| Sbjct 24217 CTTGAGCACCAGCAGCGATTCCACTTCCAGGTGCCACAGGGGGTAGAACAGCGTGGCCGC 24276 Query 135921 CCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCCAGAA 135980 ||| || || | |||||| || ||||| ||||| ||||||| ||| || || |||| Sbjct 24277 CCCTCCCCGCACACCGCCCTGCGAGCAGGACTTGACGGCAGCCTGGAACATCTTGAAGAA 24336 Query 135981 TGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGAT-CCTTCCGCGCGAA 136039 || | ||| || || | |||| || || ||| || | | || | || || | Sbjct 24337 GGGCAGGCAGCCCGTGTGCTGCGCTTCGCCGCCCCGGAT-TTCGCTGCCCACGGCACGGA 24395 Query 136040 TCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTA-ATATACTTGATGATTGCATTT 136098 | ||| | ||||| ||||| ||||| ||| ||| | | ||||||| ||| || | Sbjct 24396 TACGGCCGCCATTGATGCCGATGCCAGCGCGC-TGCGACACGTACTTGACGATGGCGCTG 24454 Query 136099 GCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACACACGAACTAAAT 136158 | || |||||||||| | || ||| || | ||| |||| ||| ||||| || || Sbjct 24455 GTGGTGGCGTTGATGCCATCCAGGCTGTCGTCGCATTCGATCAGCACGCACGAGCTGAAC 24514 Query 136159 TGGCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGCAGAGAGAT 136208 ||||| | || || ||||| || | |||||| || |||||||| || || Sbjct 24515 TGGCGCATGGGCGTGCGCACGCCGGACATAATGGGGGTAGGCAGCGAAAT 24564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525504750315600