Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4280 118 1e-21 seq1608 113 4e-20 >seq4280 Length=912600 Score = 118 bits (130), Expect = 1e-21 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154 |||||| |||| || ||||||||||| || |||||||| || ||||| |||||||| || Sbjct 357288 CTGCTTCTGGCTCCGATGCCCACGGCTTCGACGGCGCAAATTCTTGGAAACAACGAATCA 357347 Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 |||||||| | ||| |||||||| |||||| | || ||||| |||| ||||||| Sbjct 357348 TTCGAACCGTACACTTCCAACGTTTACAACCGACGAGTGCTGTCCGGAGAATTCC 357402 >seq1608 Length=1779970 Score = 113 bits (124), Expect = 4e-20 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154 ||||| |||| || ||||||||||| || |||||||| || ||||| |||||||| || Sbjct 1336885 CTGCTCCTGGCTCCGATGCCCACGGCTTCGACGGCGCAAATTCTTGGAAACAACGAATCA 1336826 Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 |||||||| | ||| |||||||| |||||| | || ||||| |||| ||||||| Sbjct 1336825 TTCGAACCGTACACTTCCAACGTTTACAACCGACGAGTGCTGTCCGGCGAATTCC 1336771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494693782521720