Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq157 109 4e-19 >seq157 Length=2906033 Score = 109 bits (120), Expect = 4e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 69531 AATGGTTATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAG 69590 ||||| |||||| | || || | ||||||||||||||||||| | || ||||| || || Sbjct 1048044 AATGGCTATGTGCTATTTTTCTTCCGAGAAGTGGCCGTCGAGTACATGAACTGTGGCAAA 1048103 Query 69591 ACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGTAC 69650 | ||||||||| | || || ||||||||||| ||| | || || ||||||| || Sbjct 1048104 GCAATTTATTCGCGTGTAAGCCGCGTCTGCAAAAACGATAAAGGAGGTCCACATCCGTTG 1048163 Query 69651 TCGGATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAATTC 69710 || ||||||||| || | || | || || |||||||| | || ||||||| Sbjct 1048164 AATGACCGATGGACGTCGTTCCTGAAAGCCCGGCTGAATTGTTCCATACCGGGCGAATAT 1048223 Query 69711 CCCTTTTACTTTGACGAA 69728 || || || || || ||| Sbjct 1048224 CCGTTCTATTTCGATGAA 1048241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408219531717752