Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq476 187 1e-42 >seq476 Length=182463 Score = 187 bits (206), Expect = 1e-42 Identities = 240/330 (73%), Gaps = 6/330 (2%) Strand=Plus/Plus Query 9110 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCG 9169 |||||| || |||||||| || || || |||||||||| ||| ||||| |||||||| Sbjct 52639 CATGGCTTCGGTCAACAAGGTGATTCTTATCGGCAATCTGGGCAAGGACCCCGAAACCCG 52698 Query 9170 CTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAA 9229 |||| ||||||||||||||| |||| ||| ||| || || || ||||| || Sbjct 52699 CTACGCCCCGAGCGGCGACGCGATCTGCAACATCACGCTGGCCACCACCGACAACTGGCG 52758 Query 9230 GGACAAGGCGAGCGGCGAGTTCAAG---GAAGTGACCGAGTGGCACCGCGTCGCTTTCTT 9286 |||||||| | |||||| ||| || | ||||| ||||||||||| | ||||| Sbjct 52759 CGACAAGGCCACCGGCGA---AAAGCGCGAGGCCACCGAATGGCACCGCGTGGTGTTCTT 52815 Query 9287 CGGCCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGA 9346 |||| ||||||||||||| || | || |||| ||||||||| ||| || | || Sbjct 52816 CGGCAAGCTCGCCGAGATCGCCGGCCAGTACCTGCGCAAGGGCAGCCAGGTGTATGTGGA 52875 Query 9347 GGGGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGA 9406 || | | || || ||||||||||| | ||||||||| || ||||| ||||| Sbjct 52876 AGGCTCCCTGCGCACCCGCAAGTGGCAGGACAAGGACGGCCAGGACCGTTACACCACCGA 52935 Query 9407 GATCGTCGCCGACAGGATGCAGATGCTCGG 9436 ||| |||||| |||| |||||||||| Sbjct 52936 AATCCGGGCCGACGAGATGAAGATGCTCGG 52965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200551572160452