Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq888 125 8e-24 >seq888 Length=58548 Score = 125 bits (138), Expect = 8e-24 Identities = 280/414 (68%), Gaps = 6/414 (1%) Strand=Plus/Minus Query 43372 GTTGCGCGATACGAAGAACAAAAGCATCGTGTGTTTGAAAATCTTACGGAAAAACAGTTA 43431 || || || ||||| | || ||| | | | || || || || | ||||| ||| | Sbjct 22809 GTGGCACGCTACGACCAGCAGAAGTACCCCATCTTCGAGAAGCTGATCGAAAAGCAGCTC 22750 Query 43432 TCCTTCTTTTGGCGTCCAGAAGAAATTGACTTATCGATCGACCGTATGCAGTACGCGAAA 43491 |||||||| ||||| || |||||| | ||| | || ||||| | | ||| ||| Sbjct 22749 TCCTTCTTCTGGCGCCCGGAAGAAGTAGACATCACGCAGGACCGGCTCGATTACCAGAAC 22690 Query 43492 ATGCCGGAACACGAAAAAATCATTTTCGATTCG-AACCTGCAATATCAAACCCTGTTGGA 43550 ||||||| ||||| || ||| ||| || | |||||| |||| || || ||| |||| Sbjct 22689 CTGCCGGACCACGAGAAGCACATCTTC-ATCAGCAACCTGAAATACCAGACGCTGCTGGA 22631 Query 43551 TACCATTCAGGGGCGCGGCCCTAACCTGGCTTTCCTCCCTATCGCTTCCGATGTCTCGA- 43609 |||| ||||||||| | || ||| |||| ||||| || | | || | || | ||| Sbjct 22630 CTCCATCCAGGGGCGCAGTCCCAACATGGCGTTCCTGCCGCTGGTGTC-GCTGCC-CGAG 22573 Query 43610 -TGGAAACGTGGATCGAAACATGGGCGTTCAGTGAAACAATCCATAGCCGCAGTTATACG 43668 |||| ||||||||||| || |||||||| ||||| ||||| ||| || || Sbjct 22572 CTGGAGACGTGGATCGAGACCTGGGCGTTTTCCGAAACGATCCACTCGCGCTCGTACACC 22513 Query 43669 CACATTCAGCGCAACCTACACATCGACCCGTCAAAAGAGTTCGATAAAATTCTGCGCAAC 43728 ||||| |||||| | || |||||| || | |||||| | || |||||||| Sbjct 22512 CACATCATCCGCAACATCGTCAACGACCCCTCTGTTGTGTTCGACGACATCGTGCGCAAC 22453 Query 43729 GAAGCGATCATGAAACGTTCGGCTTCCATGACAAAATACTACGATGACCTGATC 43782 || ||||| | ||| || | ||| | || ||||| ||||||||| Sbjct 22452 GAGCAGATCAAGCTGCGTGCGACGGACATTTCCTCGTATTACGACGACCTGATC 22399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565559968390560