Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq888 159 5e-34 >seq888 Length=58548 Score = 159 bits (176), Expect = 5e-34 Identities = 280/404 (69%), Gaps = 4/404 (1%) Strand=Plus/Plus Query 129066 ATTGATTTGGATACCGTAGTCAAGATGTCGGATTCGGTTTTCTTCAACGCCCTTGTTATT 129125 |||||| || | ||| ||||| | ||| || || |||||||| || || || ||| || Sbjct 24157 ATTGATCTGCACACCATAGTCCAAATGGCGAATGCGGTTTTCCTCCACACCGCGGTTGTT 24216 Query 129126 CTTGAGCACAAGGATTTTTTCAACTTCGAGGTGCCACATTGGGTAATATAGAGTTGCGGC 129185 ||||||||| || | ||| ||||| |||||||||| ||||| | || || || || Sbjct 24217 CTTGAGCACCAGCAGCGATTCCACTTCCAGGTGCCACAGGGGGTAGAACAGCGTGGCCGC 24276 Query 129186 ACCGCCGCGAACACCACCCTGTGAACAGCTCTTTACCGCAGTCTGGAAGTATTTCCAAAA 129245 || || || ||||| ||||| || ||| ||| || |||| |||||| || | || Sbjct 24277 CCCTCCCCGCACACCGCCCTGCGAGCAGGACTTGACGGCAGCCTGGAACATCTTGAAGAA 24336 Query 129246 TGGGATAATACCGGTATGTCGCACTTCACCGCTACGAATGCGAGATCCCTCGGCACGAAT 129305 || | || || || || |||| |||| || || ||| ||||||| || Sbjct 24337 GGGCAGGCAGCCCGTGTGCTGCGCTTCGCCGCCCCGGATTTCGCTGCCCACGGCACGGAT 24396 Query 129306 CGCACCGCCGTTGATGCCGATACCAGCGCGTTTGCTGATA--TAGTCAACGATAGAACTA 129363 ||||| ||||||||||| |||||||| ||| || | || | ||||| | || Sbjct 24397 ACGGCCGCCATTGATGCCGATGCCAGCGCG-CTGC-GACACGTACTTGACGATGGCGCTG 24454 Query 129364 GCGGTAGCGTTGATGCTATCCAGTTCGTCTCCACATTCGATCTTGACACAAGAGCTAAAC 129423 | ||| |||||||||| |||||| ||| | ||||||||| || || ||||| ||| Sbjct 24455 GTGGTGGCGTTGATGCCATCCAGGCTGTCGTCGCATTCGATCAGCACGCACGAGCTGAAC 24514 Query 129424 TGCCGAGTCGGGGTGCGAACACCTGCGAGAATCGGAGTTGGCAG 129467 || || | || ||||| || || | | ||| || || ||||| Sbjct 24515 TGGCGCATGGGCGTGCGCACGCCGGACATAATGGGGGTAGGCAG 24558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720686743616160