Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq888 91.5 2e-13 >seq888 Length=58548 Score = 91.5 bits (100), Expect = 2e-13 Identities = 200/292 (68%), Gaps = 7/292 (2%) Strand=Plus/Plus Query 136201 GGGTCATTCAGCAGGTTACGCATGATGTGAGTATATGAACGAGAGTGAATCGTTTCAGAG 136260 ||||| || | | ||| || |||||||| || || || || ||||| |||||||| || Sbjct 22484 GGGTCGTTGACGATGTTGCGGATGATGTGGGTGTACGAGCGCGAGTGGATCGTTTCGGAA 22543 Query 136261 AACGTCCAGGTCTGGTTCCATGTATCGAGTGATGGGTCAGAAATCAGAGCAGAAAGAACA 136320 |||| |||||||| | |||| || || || | || ||| | ||| | | |||| Sbjct 22544 AACGCCCAGGTCTCGATCCACGTCTCCAGC--TCGGGCAGCGACACCAGCGGCAGGAACG 22601 Query 136321 GCA-GCTGGAGCT-CGGCCTTGGATTGAATCCAGAAGGCTTTGATATTTCAGATTATCAA 136378 || | ||| || || || ||||| || ||||| || | || |||||||| || | Sbjct 22602 CCATGTTGGGACTGCGCCCCTGGATGGAGTCCAGCAGCGTCTGGTATTTCAGGTTGCTGA 22661 Query 136379 GGAATACGTTTTGCTGGCCAACTGGAAGCTTTTCA-AATTGAGCTCGGTCAGTCATCAGG 136437 ||| | || | || | | || || || | ||| |||| ||||| | | | | Sbjct 22662 TGAAGATGTGCTTCTCGTGGTCCGGCAGGTTCTGGTAATCGAGC-CGGTCCTGCGTGATG 22720 Query 136438 TTAACTTCTTCAGGACGCCAGAAGAACGAGAGTTGTTTCTCAATCAG-TTCT 136488 | |||||||| || ||||||||||| ||||| || || || ||||| |||| Sbjct 22721 TCTACTTCTTCCGGGCGCCAGAAGAAGGAGAGCTGCTTTTCGATCAGCTTCT 22772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529568508660000