Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4280 95.1 1e-14 >seq4280 Length=912600 Score = 95.1 bits (104), Expect = 1e-14 Identities = 458/720 (64%), Gaps = 25/720 (3%) Strand=Plus/Minus Query 109744 CGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGT 109803 |||||| ||| | ||| | ||||| |||||||| | || ||||| || || ||||| Sbjct 357382 CGTCGGTTGTAAACGTTGGAAGTGTACGGTTCGAATGATTCGTTGTTTCCAAGAATTTGC 357323 Query 109804 GCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC---CTTCG-- 109858 || || ||||| |||||||| ||||||| || || || || | || ||| | Sbjct 357322 GCCGTCGAAGCCGTGGGCATCGGAGCCAGAAGCAGGGAATTGCGAACGCCATGCTTGGCG 357263 Query 109859 -TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCAC-TAAATTTAGTCTCACC 109916 ||||| || ||| | || ||||||| |||| | | | | ||| Sbjct 357262 ATCTTTTCCT--TCAAG----GCAGCCCAATC-------CCACATGTCTGTTGGCTCTTT 357216 Query 109917 ATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTA 109976 | ||||||||| || || || |||| | ||| | ||| | | ||||| Sbjct 357215 GTTCCACATATCGTACTGCAGAACTCCCTTGCTCACCGGACATCCCGGATAGGTTTCGTA 357156 Query 109977 CGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036 | ||||| |||||||| || | || |||| || ||| || ||||| || Sbjct 357155 GGTACCCTCCTTTTCGGCCAATTCACAGCTTGCTTCTAAGGCACCATAGTAGATAGTTTC 357096 Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGAC-CACAAAGAA 110095 || || || ||||| ||| ||||| | |||| | ||| || || || || Sbjct 357095 GAAGATTTGCTGATTCAGTTTTTGAGCTTCTTCGCTGTCGTAAGGATAACGCATCAA-AA 357037 Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155 | || |||| || | ||||| ||||||| || || ||||| || ||| || || | Sbjct 357036 TGAAGGCATCGGCCATTCCCTGGACACCGATTCCGATCGGGCGGTGGCGCATATTGGATC 356977 Query 110156 GTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCA 110215 | || | || || || || || |||||||| ||||||||||| || Sbjct 356976 GCTTGGCCTCTGGCACTGGATAGAAATTAATGTCGATGATTTTGTTGAGATTCTTAGTGG 356917 Query 110216 CAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACAT 110275 || | || | | ||| | ||||| | | |||| | || || ||| || | || Sbjct 356916 CAATTTTTGCTACTTCTTTCAGTTTTTGGAAATCATATGTCTT-GTCGGGTT--TCACGA 356860 Query 110276 ATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATT 110335 | || | || || ||||| || || || |||| | | || || ||| || ||||| Sbjct 356859 ACATGTTCAATGCGATGGACGCTAGGTTACAAACAGCAATTTCATCCTTGGAGGAGTATT 356800 Query 110336 CCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATT 110395 | | |||||| || || | ||| || | ||| ||| || | ||||| |||||| || Sbjct 356799 CAACAATTTCGGTGCAAAGGTTTGAGCACTTGATGGTTCCGATGTTCTGCTGATTACTTT 356740 Query 110396 TGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGA 110455 | |||||| ||||||||||| |||||||| || ||| |||||| || |||| || Sbjct 356739 TCCTGTTGCAAGCATCCTTATACAGCATGTACGGAACACCGGTTTCCACTTGGGACTCGA 356680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588940978014600