Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30]
4,757 sequences; 1,383,974,186 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq3299 89.7 6e-13
seq365 89.7 6e-13
>seq3299
Length=5804
Score = 89.7 bits (98), Expect = 6e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007
||||||||||||||||| | |||||||| || | || || || |||||| | |
Sbjct 1353 ATGGTGGTCAGGTATATTTGGATGGAGCCAACATGAACGCCCAAGTAGGATTGTGTCGCC 1294
Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067
| | || | ||| ||||| | |||| | || | || ||||||||||||||||| |
Sbjct 1293 CTGGAGATTTTGGAAGCGATGTTTCTCATTTGAATCTGCACAAAACATTCTGTATTCCTC 1234
Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|||||||||||||||| || | || || || || ||
Sbjct 1233 ATGGAGGTGGAGGTCCGGGTATGGGACCAATTGGCGT 1197
>seq365
Length=325901
Score = 89.7 bits (98), Expect = 6e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007
||||||||||||||||| | |||||||| || | || || || |||||| | |
Sbjct 280088 ATGGTGGTCAGGTATATTTGGATGGAGCCAACATGAACGCCCAAGTAGGATTGTGTCGCC 280029
Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067
| | || | ||| ||||| | |||| | || | || ||||||||||||||||| |
Sbjct 280028 CTGGAGATTTTGGAAGCGATGTTTCTCATTTGAATCTGCACAAAACATTCTGTATTCCTC 279969
Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|||||||||||||||| || | || || || || ||
Sbjct 279968 ATGGAGGTGGAGGTCCGGGTATGGGACCAATTGGCGT 279932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579178358558880
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |